Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0304 ATGAAGCCTACTTCAAATTTGCATGGTCTTAATTATGATCAACAAAAGAAGATAATCCTCAATGGTCCTCGTCCTTCACCTTTGATGATTCAAAAGCCTAATTCATCTCACAAACCACAAAGGGTACTTCCTATAATCATTTACACTCAATCACCAAAGATTATTCACACAAAAGCACAAGATTTCATGGCTCTTGTTCAAAGACTCACAGGCATGTCTCCTACCAATCAACTACTGCCACGTCAGCATGGATTATCTGAAAATAATTTTGATTCTTCTTTTTCAGATGGATCAAACAATATTGGTGATGAAACTACTTCAACAATTAGCTCAATTGTTAAGAGGGAACATATTAATATTAATGAGAGTTGTGAGAAGGGGGGTGTAACTAGTAATGTTGATGATCAACAATATTATAGTCCTAATAATATGATGAATTTTGCTGATATGCCATTATACACACCAACTTCCTATGATTTCTTTTGCTCTAATTCATCTAGACCAGTTTATCAATTTTCTGATTCTCCATATGGAATTTTGGGAAGTTTGATATCTCCTTCTGGATTGGGATTCATCCAAGATCTACCTGAATATTAA 597 0.3417 MKPTSNLHGLNYDQQKKIILNGPRPSPLMIQKPNSSHKPQRVLPIIIYTQSPKIIHTKAQDFMALVQRLTGMSPTNQLLPRQHGLSENNFDSSFSDGSNNIGDETTSTISSIVKREHININESCEKGGVTSNVDDQQYYSPNNMMNFADMPLYTPTSYDFFCSNSSRPVYQFSDSPYGILGSLISPSGLGFIQDLPEY* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0304 198 Pfam VQ motif 51 75 IPR008889 -
Tpr1g0304 198 PANTHER F16F4.1 PROTEIN-RELATED 20 198 IPR039607 -
Tpr1g0304 198 PANTHER VQ MOTIF-CONTAINING PROTEIN 8, CHLOROPLASTIC 20 198 IPR039833 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0304 Tpr-Chr1 2591993 2593010 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0304 1 2591993 2593010 Tpr1g0304 1 2591993 2593010 ECH