Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0303 ATGCCTACAACAACAACACCACCTTCATTTTTCTCACTCCACCCTCAACTACGTTATAATAATTATTATCATCAACACAAACCCATTAAATTTCCCAACTTTTCACGCACTCATTTCTCCACCGCCGCCACACGGCGGCCTAACTGGCCACGCATGGAAGTATCCTCCACACGCCACCGTTGGAAAGACAAAGTTATCGTCATAATGGGTGCCACCGGCTCCGGAAAATCAAGTCTTTCCGTTGAACTCGCAACCCATTTCCCTTACTCAGAAATAATCAACTCCGATAAAATCCAAGTCTTCAAAGGACTCGATATCACCACCAACAAGATCCCCTTTCATCAACGCAACAACGTTCCTCATCATCTTCTCGGCGACGTTGACCCTTCTCACGGCGAGTTTTCACCTTCAGATTTTCGTCGTCACGCCGGAGATATTATCTCAGATATAACTTCACGGAGAAAGGTTCCCATTATTGTTGGTGGGTCTAACTCATTCATTCATGCTCTTCTTGTTGAACGATTTGACTCAGAGTTGAACGTGTTTGAAGACGATTCATCAAAAACATCATTATCGGAGATATCATCGGATTTAAGGTACAAATGTTGCTTTATTTGGATGGATATATCGTTTCCTGTGTTATCGGAATATTTACGGAAACGAGTCGACGATATGTTTGACTCGGGAATGGTGGACGAGTTAGCCGAGTTTTATGAACCGGATGCAGATAACCGAACCGGTCTAAGAAAAGCAATCGGTGTACCCGAGTTCGACCGGTTTTTTAAAGAGTATCCACCACCGGTTGGACCCATGGAAAAAGAAGGTAATAATTCAATGCGGGAACTTGCATACGAGGAAGCAGTGAAAGCGATTAAAGATAACACGTGTCAGCTAGCTAAGCGTCAGATAGGAAAGATCTTACGGTTAAAACGAGCTGGATGGGACCTACAAAGAATTGATGCAACGGAGGCGTTTAGGGCGGTGCTGACGTCAGAGTCTAACGGCGGTAACGGCGGAGGAGAAGGATTTTCCGATGTATGGAAAAAACAAGTGTTGGAACCAAGCGTGAAGATTGTGAAGAGATTCTTGATGGAGTAG 1098 0.4444 MPTTTTPPSFFSLHPQLRYNNYYHQHKPIKFPNFSRTHFSTAATRRPNWPRMEVSSTRHRWKDKVIVIMGATGSGKSSLSVELATHFPYSEIINSDKIQVFKGLDITTNKIPFHQRNNVPHHLLGDVDPSHGEFSPSDFRRHAGDIISDITSRRKVPIIVGGSNSFIHALLVERFDSELNVFEDDSSKTSLSEISSDLRYKCCFIWMDISFPVLSEYLRKRVDDMFDSGMVDELAEFYEPDADNRTGLRKAIGVPEFDRFFKEYPPPVGPMEKEGNNSMRELAYEEAVKAIKDNTCQLAKRQIGKILRLKRAGWDLQRIDATEAFRAVLTSESNGGNGGGEGFSDVWKKQVLEPSVKIVKRFLME* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0303 365 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 56 364 IPR039657 -
Tpr1g0303 365 Gene3D - 62 363 IPR027417 -
Tpr1g0303 365 Pfam IPP transferase 181 303 - -
Tpr1g0303 365 Pfam IPP transferase 99 175 - -
Tpr1g0303 365 Hamap tRNA dimethylallyltransferase [miaA]. 65 330 IPR018022 GO:0008033
Tpr1g0303 365 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 56 364 - -
Tpr1g0303 365 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 241 IPR027417 -
Tpr1g0303 365 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 211 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0303 Tpr-Chr1 2573371 2575111 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0303 199 363 C2H2 Transcription Factor Family AT2G27760 32.973 9.82e-19 85.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0303 1 2573371 2575111 Tpr1g0303 1 2573371 2575111 ECH