Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0302 ATGGAGCTATCTCTGACTGCGACACACCGATTCGGATCACAAAACCACTTCTCTTTACCCTTAGAACACAATCCTCAAAATCACCATCATCTATGTCCAATACCCATTTCAACCAAACTCAAGAAATTACCAAACACTACAAAAACAACACTTAGAGTGAGCGCAAAGAAAAAGTCAACCATTGAAGGTATCAGTGATGAGTTGAATTCTATAGCTTCTCTTAACCTTGATTTTGCACCCTCTCGTAGACAGGTTCGAGAAGCCTTTACTCATGTGCATCAGCAACTAGATCATTTCTTATTCAAGACTGCACCTGCTGGGATCATAACTCAAGAATGGTATGAAAGGAATTCGAGAGGATTGGAGATTTTCTGCAAAAGTTGGATGCCAGAACATGGAGTTGCAATCAAAGGGGCTTTGTTTTTCTGTCATGGATATGGCAGTACTTGCACTTTCTTCTTTGAAGGTATTGCCAGGCGAATTGCTGCTTCCGGGTTTGGTGTTTTTGCAATGGATTTTCCCGGTTTCGGTTTATCTGAAGGATTACATGCTAGACCTGAGGTGAGAGATTTGCCACAATTTATTTTTGGACAGTCAATGGGTGGAGCAATTGCTCTTAAAGCTCATTTGAAGCAACCAAATGATTGGGATGGAGTAATCCTTGTTGCTCCAATGTGTAAGATTTCAGAAGGCATGTTACCATCAACTACAATTTTGAAGGTGTTAACTTTCTTGTCTAAAATGATGCCAAAGGCAAAACTTTTCCCTTATAAGGATCTAACTGCGCTGATTATCCGAGAACCTGGCAAGAGAAAATGGGCCGGATACAATGTTATTTCTTACGATGATCAAACGCGGTTAAGAACTGGCATGGAACTCTTACGTGCCACTCAGGATATTGAGTCACGGTTAGAGAAGGTTTCAGCTCCATTATTGATTCTTCATGGAGCAGAGGATAAGGTGACAGATCCATTGGTGAGCCAATATCTGTATGAGAAAGCATCTAGCAAAGATAAGACACTAAAGATCTATGAAGGAGGGTACCATGGCATTATGGAAGGTGAACCTGATGAAAGAATTTCTGCTGTCCATAGTGACATTATCTCGTGGCTTGAATTTAGGTGCACAAGATAA 1134 0.4083 MELSLTATHRFGSQNHFSLPLEHNPQNHHHLCPIPISTKLKKLPNTTKTTLRVSAKKKSTIEGISDELNSIASLNLDFAPSRRQVREAFTHVHQQLDHFLFKTAPAGIITQEWYERNSRGLEIFCKSWMPEHGVAIKGALFFCHGYGSTCTFFFEGIARRIAASGFGVFAMDFPGFGLSEGLHARPEVRDLPQFIFGQSMGGAIALKAHLKQPNDWDGVILVAPMCKISEGMLPSTTILKVLTFLSKMMPKAKLFPYKDLTALIIREPGKRKWAGYNVISYDDQTRLRTGMELLRATQDIESRLEKVSAPLLILHGAEDKVTDPLVSQYLYEKASSKDKTLKIYEGGYHGIMEGEPDERISAVHSDIISWLEFRCTR* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0302 377 Gene3D alpha/beta hydrolase 109 375 IPR029058 -
Tpr1g0302 377 PANTHER PHOSPHOLIPASE-RELATED 48 184 - -
Tpr1g0302 377 PANTHER PHOSPHOLIPASE-RELATED 183 375 - -
Tpr1g0302 377 Pfam Serine aminopeptidase, S33 137 184 IPR022742 -
Tpr1g0302 377 Pfam Serine aminopeptidase, S33 186 356 IPR022742 -
Tpr1g0302 377 PANTHER ALPHA/BETA-HYDROLASE SUPERFAMILY PROTEIN 48 184 - -
Tpr1g0302 377 PANTHER ALPHA/BETA-HYDROLASE SUPERFAMILY PROTEIN 183 375 - -
Tpr1g0302 377 SUPERFAMILY alpha/beta-Hydrolases 91 371 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0302 Tpr-Chr1 2561217 2564646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0302 53 374 Acyl Lipid Metabolism Gene Families AT1G77420 58.017 8.22e-146 416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0302 1 2561217 2564646 Tpr1g0302 1 2561217 2564646 ECH