Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0301 ATGTCACTTCTTAATCAACTCTTTAACAGAGGCGTTTTTTCCACTCGATGCAAAACATGTCTGAACCTGGCGATTTCACGCATGAAGTTGTTACAAAACAAGAGAGATGTTCAACTGAAACAAATGCGCAAGGAGATATCTCAATTTTTGCAGGCTGGCCAAGAGCCGATTGCTAGGATTCGGGTGGAGCATATCATACGAGAACAAAATATATGGGCTGCATATGAAATATTGGAGTTATTCTGTGAATTTGTCCTTGCACGTGTTCCTATAATTGAGAGCCAGAAGGAATGCCCCCCGGAATTGCGAGAAGCCATTGCAAGTATAATTTTTTCTGCTCCTAGATGTTCTGATATACCAGACTTATTGCACATCAAGAACTTGTTTACTACTAAATATGGAAAAGAATTTGTCTCTGCAATATCTGAACTTCGTCCGGATTCAGGCGTGAACCGCACAATAATTGAAAAGCTTTCAGTTAGTGCTCCATCTGGAGAGGTAAAACTCAAGGTATTGACAGATATTGCAGAAGAATACAATCTTGCATGGGACTCTTCTAAAACTGCAGCAGAATTTAGGAAAAATCATGAAGATCTCCTGGGTGGATCAAAGCAAGTTGGTGTTGGAGCTGCAGTTTCTCACTCTCCCAGCAAAAACAGTTCTAATAATTCATCAGCTCGTATCACAGAACATTCTATCAAATCAATGCATGATAAACAAGAACATGTACACGTTGAAGCGTCCATCCCTTCCAACAATAATTCTTGGCTGATCACCAACGAAATTGAGAACAATAATAACAATGTCCACGTTAAAGATGCTAAAAGTGAGACTATATTCAACCCCTCGGATATATTAGAGAAGGCTCGGGCTGCCATTGCTTCAGCAGATCGTGCAACTGCAGCTGCTCGTGCCGCAGCGTCACTTGTCCATACTAACTTTGGATCATTGAAGCTGGAAGGTGAATCTTCATAG 975 0.4092 MSLLNQLFNRGVFSTRCKTCLNLAISRMKLLQNKRDVQLKQMRKEISQFLQAGQEPIARIRVEHIIREQNIWAAYEILELFCEFVLARVPIIESQKECPPELREAIASIIFSAPRCSDIPDLLHIKNLFTTKYGKEFVSAISELRPDSGVNRTIIEKLSVSAPSGEVKLKVLTDIAEEYNLAWDSSKTAAEFRKNHEDLLGGSKQVGVGAAVSHSPSKNSSNNSSARITEHSIKSMHDKQEHVHVEASIPSNNNSWLITNEIENNNNNVHVKDAKSETIFNPSDILEKARAAIASADRATAAARAAASLVHTNFGSLKLEGESS* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0301 324 Pfam Regulator of Vps4 activity in the MVB pathway 18 181 IPR005061 GO:0015031
Tpr1g0301 324 MobiDBLite consensus disorder prediction 210 226 - -
Tpr1g0301 324 Gene3D - 5 192 IPR042277 -
Tpr1g0301 324 MobiDBLite consensus disorder prediction 206 226 - -
Tpr1g0301 324 PANTHER IST1 FAMILY MEMBER 15 309 IPR005061 GO:0015031
Tpr1g0301 324 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 15 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0301 Tpr-Chr1 2553725 2559262 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0301 1 2553725 2559262 Tpr1g0301 1 2553725 2559262 ECH