Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0298 ATGAGTACTGCTGCTGCTTTTCTGATTCCAGTCTCCTCGCTACCCTCTCTCGCTTCTCCTTTCAAGGGAAATTTGAAAACCTTGGTAGCAAAACCATGTCTATGTCCATGTCTCAAAATTCAACGAACAAGACCCCGTGTTTCTGTCGTTATTAATAAGGCTGGTGTTTATGCTACTACCACCAAACCAGGCGGTGAAAATGTTCGGTTTAGGTTGGACAATTTAGGTCCTCAACCTGGTTCAAGAAAGAAAGCAAAGAGAAAGGGAAGAGGTATATCTGCAGGACAAGGAGCAAGTTGTGGTTTTGGAATGAGAGGGCAAAAATCGAGGTCCGGACCCGGTATTATGAGGGGTTTTGAAGGTGGTCAGATGCCGCTTTATCGACGTCTCCCCAAACTTAGAGGAATTGCAGGAGGTATGCATGCGGGATTGCCAAAATATGTCAACGTAAATCTGGAGGATATTGAAAATGCTGGATTTGAAGAAGGGGAAGAGGTGTCTTTGGAGACACTGACGGAGAGACGTGTGATCAACCCATCAGGAAGAGAACGAAAACTTCCTTTGAAGATTTTGGGTGATGGAGAACTAAGCAAGAAGTTAAAAATAATAGCCGGCGCCTTTTCAACAGCAGCAAAGGAGAAACTTGAGTCTGCTGGTTGTTCCCTCACCGTGCTACCTGGCCGTAAAAAATGGGTTAAGGCATCAGTTACCAAAAACAATGCTCGTGCTGATGAATACTTTGCCAAGAAGCGAGAAGCAGCTGCTTCTGAACCGGTCCCTGCTTAA 786 0.4529 MSTAAAFLIPVSSLPSLASPFKGNLKTLVAKPCLCPCLKIQRTRPRVSVVINKAGVYATTTKPGGENVRFRLDNLGPQPGSRKKAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLRGIAGGMHAGLPKYVNVNLEDIENAGFEEGEEVSLETLTERRVINPSGRERKLPLKILGDGELSKKLKIIAGAFSTAAKEKLESAGCSLTVLPGRKKWVKASVTKNNARADEYFAKKREAAASEPVPA* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0298 261 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 96 222 IPR021131 -
Tpr1g0298 261 TIGRFAM rplO_bact: ribosomal protein uL15 72 222 IPR005749 GO:0003735|GO:0006412|GO:0015934
Tpr1g0298 261 MobiDBLite consensus disorder prediction 75 94 - -
Tpr1g0298 261 PANTHER BNAA06G33230D PROTEIN 16 256 - -
Tpr1g0298 261 Hamap 50S ribosomal protein L15 [rplO]. 72 225 IPR030878 GO:0003735|GO:0006412|GO:0015934
Tpr1g0298 261 ProSitePatterns Ribosomal protein L15 signature. 189 219 IPR001196 GO:0003735|GO:0005840|GO:0006412
Tpr1g0298 261 Gene3D - 147 224 - -
Tpr1g0298 261 PANTHER 50S RIBOSOMAL PROTEIN L15 16 256 IPR005749 GO:0003735|GO:0006412|GO:0015934
Tpr1g0298 261 SUPERFAMILY Ribosomal proteins L15p and L18e 73 224 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0298 Tpr-Chr1 2511181 2516730 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0298 1 2511181 2516730 Tpr1g0298 1 2511181 2516730 ECH