Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0278 ATGCAGCAATCAGATAAGAAAATGGCAAGAATCGGTTCATTCCGACACAGTTTCTTAGAAAAGAGCAAAGAGAGACTCATTGCTAAAAAGGATCCTCAATACCACCCTTACGATTTCGATCCCAACCAACAACAACCACCTAAACGTGGTTTCAATCTCGACGCAATTTCTGAACGTGTCACCAACATTCGCAATGCCTCCACTAATTTCATCATTAAACTATACGAGATGGGTCGCAATGATCAACGCAAAGTTGTTTTCGCCATGAAAGCTGGTTTATCTTTGGCTCTTGTTTCTCTTTTCGTTTACATTAAAGAAGAAGAATTTAATAAATACTCTATTTGGGCTATTCTCACTGTTGTCGTTGTTTTTGAATTCAGCATAGGTGCTACCCTTAACAAAGGGTTCAATCGTGCTTTGGGAACAGTTTCAGCTGGACTTATTGCTTTGGTCATTGCAAGATTATCTGTTTCTGTTGGTGGAGCTTTTGAGGAACTTATTATTGTCATTGCTATTTTTTTTGCAGGGTTTTGTGCAAATTATGTGAAGCTGTATCCTGCAATGAAGCCTTATGAATATGGATTTCGCGTATTCTTGTTAACATTTTGCATTGTGTTGATATCCGGGAGACACGGAATGAAGTTTATAACCACTGCTTTTTATAGATTGGTTCTTATTGGTGTTGGTGCTGGTGTGAGTTTGTCTGTCAATATTTGCATTTACCCTATTTGGTCTGGCGAGGATCTCCACAAATTGGTCGTAAAAAATTTCCATGGAGTTGCTGGATCTTTAGAAGGTTGTGTAAATGGATATCTACAATGTGTTGAATACGAGAGGATCCCATCTAAAATACTTGTATATCAAGCCTCTGATGACCCTCTTTACCGTGGTTATAGAACAGCAGTGCAATCTTCAAGCCAAGAGGAGACTTTGGTAGATTTTGCATTATGGGAACCACCTCATGGTCCATACAAGATGTTCAATTATCCTTGGAAAAGCTATGTGAAACTTAGTGGAGCATTGAGGCATTGTGCTTTCATGGTCATGGCAATGCATGGATGCATACTTTCAGAAATACAGTCACCCCCGGAAAAGAGGTTGGTATTCTATCAAGAACTTCAGAAGGTTGGTGCCGAAGGAGCTAAAGTATTACGTCAACTAGGAAGCAAAGTCGAAAAGATGGAGAAGCTAAGCAGAAGTGACATTCTGTTAGAAATTCATGAGGCAGCTGAACTATTACAGATGAAGATTGATAGCCATTCATACCTTCTAGTCAATTCAGAGAACTGGGAAGCTGTAAGACAACACCAGTCTAGACAAAATGAAAAATCTCAAAATTTGATCGATGAAAATAATAAGCAGTTGGCGACCAATGAATTGGGAGACGATTCAAAACTTAGTATAAGCATACAACATTCAGTGGCTGAGTCGAGCTTCGCGCAAACCATGAACAAGAGCTTAGTATCATGGCCTCACCTCTCTTTTTGCACTGATGTTATACTAAATGAGGCAGAATCTAAAGTTTATGAAAGTGCTAGCTCATTGTCTTTGGCTACATTTGCTTCGCTTTTAATCGAGTTTGTTGCAAGACTTCAAAATCTTGTGGATGAATTCCAAGATCTTAGTGAGAAGGCTAAATTTAAAGATCCATTTGATCAACCTATAGTAAATTAA 1674 0.3871 MQQSDKKMARIGSFRHSFLEKSKERLIAKKDPQYHPYDFDPNQQQPPKRGFNLDAISERVTNIRNASTNFIIKLYEMGRNDQRKVVFAMKAGLSLALVSLFVYIKEEEFNKYSIWAILTVVVVFEFSIGATLNKGFNRALGTVSAGLIALVIARLSVSVGGAFEELIIVIAIFFAGFCANYVKLYPAMKPYEYGFRVFLLTFCIVLISGRHGMKFITTAFYRLVLIGVGAGVSLSVNICIYPIWSGEDLHKLVVKNFHGVAGSLEGCVNGYLQCVEYERIPSKILVYQASDDPLYRGYRTAVQSSSQEETLVDFALWEPPHGPYKMFNYPWKSYVKLSGALRHCAFMVMAMHGCILSEIQSPPEKRLVFYQELQKVGAEGAKVLRQLGSKVEKMEKLSRSDILLEIHEAAELLQMKIDSHSYLLVNSENWEAVRQHQSRQNEKSQNLIDENNKQLATNELGDDSKLSISIQHSVAESSFAQTMNKSLVSWPHLSFCTDVILNEAESKVYESASSLSLATFASLLIEFVARLQNLVDEFQDLSEKAKFKDPFDQPIVN* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0278 557 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 12 554 - -
Tpr1g0278 557 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 4-RELATED 12 554 - -
Tpr1g0278 557 Coils Coil 524 544 - -
Tpr1g0278 557 Pfam Aluminium activated malate transporter 76 542 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0278 Tpr-Chr1 2321133 2323825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0278 57 549 Miscellaneous Gene Families AT1G25480 62.500 0.0 613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0278 1 2321133 2323825 Tpr1g0278 1 2321133 2323825 ECH