Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0276 ATGTATCACCACAAAAAATTTCATTCATTCCTTTGTTTCTTACTTCACTCACCAAAACCAATGACTACTCTTACCTCAAATCTAAACCTTATCTCACAACATTCTAAAAATCATCAACAACACCATAGTTCTTCAATTGTTGAGGAAATTAAAGGCCTAATTAGAGTACACAAAGATGGTTACATAGAAAGACCAAATATTGTTCCATGTGTCACAACTGATTTATCTCCAAATTTGAATGTTATTTCTAGAGACATAATCATTGACAATGTTACAAATATTTGGGCACGTTTTTATGTTCCAAATTCTCAAATAAAAAACCTACCTATATTAGTTTATTTTCATGGTGGTGGCTTTTGTGTTGGTTCTGCAGCTTGGAGTTGCTACCATGAATTTCTTGCTATGCTATGTTCAAAAATTGGTTGCTTAATTATGTCAGTTAATTATAGATTAGCACCAGAAAATCCTCTTCCAGCACCTTATGATGATGGTTTAAATGCATTAATATGGTTGAAAAAACAATTTTTATATCAAAATGAAAATAGTGAATTTTCATGGTGGACTAAAAAATGCAACTTTTCTAATGTCTTTTTAGGTGGTGATAGTGCAGGTGGTAACATAGCTTATAATGTTGCCAAAAGGGTAAATTCATGTGAAAGTGATTTTTTAAGGCCTTTAAATTTAAAGGGTCTTATTTTGATACAACCATTTTTTGGTGGAAAAGTTAGAACAGAATCAGAGAAATGTATAGCTGGTTCTGCTTTGAATTTGGTAGCATCGGATACTTATTGGCGATTGGCGTTACCGTATGGCGAAGATCGTGATCATCCGTGGTGTAATCCATTGGTGAAATTGGAGGAATTGAAGGTATTGATGATGCCTATGTTGGTTTGTATTTCTGAAATGGATATATTGAAAGATAGGAACTTGGAGTTTTGTGATGCTTTGGAAAGTGTTGGTAAAAGGGTTGAGTATGAAGTGTTTAAAGGTGTAGGACATGCTTTTCAGATTCTTAGTAAATCTCAGGTTTCTAAGATAAGAGTTGTTCAAATGATGGATTGTGTCAAATCCTTCATGGATCTTTGA 1086 0.3324 MYHHKKFHSFLCFLLHSPKPMTTLTSNLNLISQHSKNHQQHHSSSIVEEIKGLIRVHKDGYIERPNIVPCVTTDLSPNLNVISRDIIIDNVTNIWARFYVPNSQIKNLPILVYFHGGGFCVGSAAWSCYHEFLAMLCSKIGCLIMSVNYRLAPENPLPAPYDDGLNALIWLKKQFLYQNENSEFSWWTKKCNFSNVFLGGDSAGGNIAYNVAKRVNSCESDFLRPLNLKGLILIQPFFGGKVRTESEKCIAGSALNLVASDTYWRLALPYGEDRDHPWCNPLVKLEELKVLMMPMLVCISEMDILKDRNLEFCDALESVGKRVEYEVFKGVGHAFQILSKSQVSKIRVVQMMDCVKSFMDL* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0276 361 SUPERFAMILY alpha/beta-Hydrolases 42 340 IPR029058 -
Tpr1g0276 361 Pfam alpha/beta hydrolase fold 111 336 IPR013094 GO:0016787
Tpr1g0276 361 PANTHER ARYLACETAMIDE DEACETYLASE 32 359 - -
Tpr1g0276 361 Gene3D alpha/beta hydrolase 52 360 IPR029058 -
Tpr1g0276 361 PANTHER CARBOXYLESTERASE 6-RELATED 32 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0276 Tpr-Chr1 2307587 2308861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0276 21 359 Carbohydrate Esterase AT5G16080 50.862 2.84e-113 332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0276 1 2307587 2308861 Tpr1g0276 1 2307587 2308861 ECH