Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0274 ATGATGCAAAACTTCAACACAGCTCAATCAGATTCACCACTCTATTCTCACTCTTCCTTCTTGCTGAGGGGAGATGAACCCTTTCCCAATCTATATCCACCAACGCGTTTCTTTGATCCTCAACTTTCATTTCAACAACACCACCATGCTGTTGATTTAAGTTCTGTGTTTGGTGCAAAGTCTAATAATGTTGCTGCTGTTGCAAGTAACTTGCAGTACGGAACATTCAACAATTATAACTTTGGTTCAGCTTCTTCAGCTATGGAAGATAACAGTCAAAAGACTGAAGATACTTCAACAGAAGATAATATTGACATTGATCATAAAAACAACCAATGTTTCTCTAATGTGTCTTGGTGCAATGGTGTTGGGAACAAAGCTCTTGTAGATGTTGACTCCAAGGATCAATGTAATAGTACTAAGGATAAAACTGAGGAGCAAAAGACTCTTCGTCGGCTTGTGCAGAATCGTGAGGCTGCAAGGAAAAGTCGGTTAAGGAAAAAGGCATATGTGCAGCAATTGGAGAACAGTCGACTTAGGCTTGCTCAAATAGAGCAAGAGCTTCAACAAGTACAACAGCAGGGTGTATTTGTTGCAAATGGTGTTGCAGCGGATCGTGGTCATTCAGTTGTTGGAAACGGTGCATTAGCATTCGATATGGACTATGCCCGTTGGGTTGACGAACATCAACGATTAATCAATGACATAAGATTAGCTATAAATTCACAAATCGGCGATAATGAACTGCATCTTCTTGTTGATGGTGCCATGACACATTATGATGAGTTATACAAGTTGAAGAGTATAGGTGCAAAAGCTGATGTATTTCACATACTTTCTGGGTTGTGGATAACACCTGCAGAAAGATGTTTCATGTGGCTCGGTGGATTCCGTTCATCTGAACTTCTCAAGATAGTTACAAACCACCTTGAGGCATTAACGGATCCACAGTTGATGGCGATCTACAATCTGCAGCATTCTTCTCAGCAGGCTGAAGATGCATTATCTCAAGGCATGGAAGCATTGCAACAATCTCTTACAGAAACACTTTCCTCTACCTCATCCACTGCATCTGGAAATGTTGCCGAGTATATGGGCCAAATGGCCATTGCAATGACCAAACTTGCCACACTAGAGACTTTCATTCATCAGGCTGATCTCTTGAGGCAACAAACACTGCAACAGTTGAATCGAATTTTGACCGCGCGCCAAGCTGCTCGTGCTCTCCTTGTGATAAACGATTTCATTTTACGAATTCGAGCACTCAATTCATTATGGTTAGCCTGTCCTAAAGAATACTAG 1302 0.414 MMQNFNTAQSDSPLYSHSSFLLRGDEPFPNLYPPTRFFDPQLSFQQHHHAVDLSSVFGAKSNNVAAVASNLQYGTFNNYNFGSASSAMEDNSQKTEDTSTEDNIDIDHKNNQCFSNVSWCNGVGNKALVDVDSKDQCNSTKDKTEEQKTLRRLVQNREAARKSRLRKKAYVQQLENSRLRLAQIEQELQQVQQQGVFVANGVAADRGHSVVGNGALAFDMDYARWVDEHQRLINDIRLAINSQIGDNELHLLVDGAMTHYDELYKLKSIGAKADVFHILSGLWITPAERCFMWLGGFRSSELLKIVTNHLEALTDPQLMAIYNLQHSSQQAEDALSQGMEALQQSLTETLSSTSSTASGNVAEYMGQMAIAMTKLATLETFIHQADLLRQQTLQQLNRILTARQAARALLVINDFILRIRALNSLWLACPKEY* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0274 433 Coils Coil 167 194 - -
Tpr1g0274 433 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 146 190 IPR004827 GO:0003700|GO:0006355
Tpr1g0274 433 Pfam Seed dormancy control 233 307 IPR025422 GO:0006351|GO:0043565
Tpr1g0274 433 SMART brlzneu 144 215 IPR004827 GO:0003700|GO:0006355
Tpr1g0274 433 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 151 166 IPR004827 GO:0003700|GO:0006355
Tpr1g0274 433 SUPERFAMILY Leucine zipper domain 148 191 IPR046347 GO:0003700|GO:0006355
Tpr1g0274 433 Gene3D - 148 195 - -
Tpr1g0274 433 ProSiteProfiles DOG1 domain profile. 215 429 IPR025422 GO:0006351|GO:0043565
Tpr1g0274 433 PANTHER TRANSCRIPTION FACTOR TGA9 44 432 - -
Tpr1g0274 433 Pfam bZIP transcription factor 145 177 IPR004827 GO:0003700|GO:0006355
Tpr1g0274 433 PANTHER TRANSCRIPTION FACTOR PERIANTHIA 44 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0274 Tpr-Chr1 2300842 2304215 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0274 1 432 bZIP Transcription Factor Family AT1G68640 50.625 9.23e-144 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr1g0274 DOG1 1.8e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0274 1 2300842 2304215 Tpr1g0274 1 2300842 2304215 ECH