Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0268 ATGAATTCTCCAACTTCCTCTTCTTCTTCCTCCGACTTCGTTTCTATAGCCAACACCGATCAGAGTGCAGCCCGGAGTAGGAGAAGCGGCACCGGCAGTGAAGTGGCGGCGGTGGAACAATCGCGCCGGTGGCATGATGTTTTCTGGTTAGGAATATTTTTGATCCATTTGATTGGACTGGGATTCCTTCTAGGGGTTCTTGGTCTCAATAGGTTTGAGAAAGAGAATAGACTTAACATTGATAAGTATACCCCTGGTATTTCTCGGAATGAGGCCGGGTTGACTGAGACTTACTGGCCACTCTATGCTGTTGCTGGTGGAATTGGGACTTTCCTCGGATGGACTTGGATGTTGTTGTTGGGTTCCCAAGCTACTCAAATGATGAAGGTTTCTGTTCACATCTTGGCCACTTATCTGGCTGTCATCAGCGTTTTGTGTTTCTGGACAGCCCAGATTTTCTGGGGGGTTGCTTTTGCTGTTGGAGCTGTTCTTCAGTTCTTGTATGTTATATCTGTCATCGATAGACTTCCATTTACGATGTTGGTTCTGCAAAAAGCTGTGAAGATGGTCTGGAATCTTCCTGAGGTGATGAGAGTGTCATATGCATTTATGTTTGCTGTGCTTTTATGGATGGCCTTATGGTCATTTGGAGCAGCAGGTGTTGTGGCTTCAAACTTGAGTGATGGGGGACGCTGGTGGCTTCTTGTGGTTTTCTCTGTAAGCTTATTTTGGACAGGTGCAGTGCTCTGCAATACTGTGCATGTAATAGTGTCTGGAATGGTGTTTCTTGTTCTTTTCCATGGTGGTAGAGAGGCAGCTTCAATTCCCGCTAACTCCTTAATGAAATCATTACAATATGCTTTAACAACATCTTTTGGTAGCATTTGTTATGGATCATTGTTCACTGCTGCTATTAGGACGCTGCGATGGGAGATACGCGGACTTCGGTCAAAGATCGGCAACAATGAGTGTTTGCTTTGCTGTGTTGATTTCGTTTTCCATCTTGTGGAGACTCTTGTTCGATTTTTTAACAAATATGCCTACGTTCAGATTGCTGTTAATGGTAAAAGTTTTAACAATTCGGCTAGAGATGCATGGGAGTTATTCCAGTCAACTGGGGTTGAGGCACTTGTGGCATATGATTGTTCAGGTGCTGTCCTGCTAATGGGCACCGTATTTGGTGGACTGATAACTGGAACTTGCGCCGGTGTATGGGCATGGGTTAAATGGAGTGACAGGGTTATTATGATTGGCTCCACATCCATGCTCATGGGTATGGTTTTGGTTGGATTGGCAATGGTTGTGGTGGAGAGTGCTGTTACATCGATATATATTTGCTATGCAGAAGACCCTTTATTGATTCAGAGATGGGATGCTGATTTTTTCAACCAGATGTCCGAGACACTACATCATCGACTTCAATACAGGAGTGCTCGACCAAGGGACTACCGATTCCATGATGACCCCATACGAGAAAACACCTCTATTTGA 1491 0.4474 MNSPTSSSSSSDFVSIANTDQSAARSRRSGTGSEVAAVEQSRRWHDVFWLGIFLIHLIGLGFLLGVLGLNRFEKENRLNIDKYTPGISRNEAGLTETYWPLYAVAGGIGTFLGWTWMLLLGSQATQMMKVSVHILATYLAVISVLCFWTAQIFWGVAFAVGAVLQFLYVISVIDRLPFTMLVLQKAVKMVWNLPEVMRVSYAFMFAVLLWMALWSFGAAGVVASNLSDGGRWWLLVVFSVSLFWTGAVLCNTVHVIVSGMVFLVLFHGGREAASIPANSLMKSLQYALTTSFGSICYGSLFTAAIRTLRWEIRGLRSKIGNNECLLCCVDFVFHLVETLVRFFNKYAYVQIAVNGKSFNNSARDAWELFQSTGVEALVAYDCSGAVLLMGTVFGGLITGTCAGVWAWVKWSDRVIMIGSTSMLMGMVLVGLAMVVVESAVTSIYICYAEDPLLIQRWDADFFNQMSETLHHRLQYRSARPRDYRFHDDPIRENTSI* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0268 496 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 25 491 - -
Tpr1g0268 496 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 25 491 IPR007603 GO:0022857|GO:0055085
Tpr1g0268 496 Pfam Plasma-membrane choline transporter 157 451 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0268 Tpr-Chr1 2244710 2248798 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0268 1 2244710 2248798 Tpr1g0268 1 2244710 2248798 ECH