Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0267 ATGGGTCTTCAATTTTTCAACTTAATCCTCTTCATCTTATGGGCTTCACCATTGGCACATTCTAGAAACATACCCCACAATGCCAAAACTACACTACTCAATGTTGCTGATTCCATTCAAAAAACACACCAAGTTCTCAACTTCAACCAAAACAACCTTAAACAACAACAACAACATAAGAGTTATGTTTCTTCTTTATCATCGTCATCAACACTCTCTCTACAACTACATTCAAGAGCATCCATTCATAAATCTTCACATGCTGACTATAAGTCACTAACATTATCCAGACTCGACCGTGACTCAGCCCGAGTCAAATTCATAGTGACTCAGTTAGATCCAAATTTCAATGCAGAGAAACTTTCTGGTCCCATTATCTCCGGAACGAGTCAAGGTAGCGGCGAGTACTTTTCCCGACTCGGAATCGGTGAGCCACCGAGTCAAGCTTACATGGTGCTTGACACTGGTAGTGACATAAGCTGGGTACAATGCGCACCCTGCGCCGATTGTTATCGCCAAGCCGATCCAATTTTCGAGCCGACTTCATCAGCTTCTTACACGCCGCTAACTTGTGAAGCCAATCAATGCAAATCGCTAGACCTATCTCAGTGCCATAACGGTAACTGTCTCTACGAAGTTTCCTACGGTGACGGCTCTTACACCGTAGGTGACTTCGTTACGGAGACGGTTACAATCGGCGCGACTTCAGTTCAGAATATAGCCATCGGCTGCGGTCATAATAACGAAGGTTTGTTCGTTGGTGCAGCCGGCTTACTCGGCTTAGGTGGCGGCCCACTTTCTTTTCCGGCTCAGCTTAATACGACGTCGTTTTCATATTGTCTAGTAGATCGTGATTCTGATTTGGTTTCAACCCTAGAGTTTGACTCACCGTTTTCTCGTAACGCCGTTACCGCGCCGTTACGGCGTAATCGTCAATTAGACACGTTTTACTATGTTGGACTCGTTGGGATAAGTGTCGGCGGGGAGTTACTTCCGATTCCGGAGACAAGTTTTCAGGTAGATGCCACCGGAAGTGGAGGGATAATTGTTGATTCCGGCACGGCGGTGACACGGTTGCAGAGTGACGTGTATGACATTGTTCGTGATGCGTTCGTGAATGGAACGAAGGATTTACCGGAGACGAATGGTGTTTCGTTGTTTGATACTTGCTATGACCTGTCGGCGAAGACAAGTGTGGAGGTTCCGACGGTGGCGTTTCATTTTGGGGAAGGGAAAGTTTTGGTGATGCCGGCGAAGAATTACCTGGTACCGGTTGATTCGGTGGGGACATTTTGTTTTGCATTTGCTCCAACGACGTCGTCTTTGTCGATAATTGGGAATATTCAACAGCAAGGGACACGTGTCAGTTTTGATATTGGAAACTCGCTAATTGGATTTACTCCTAACAGTTGTTAA 1416 0.459 MGLQFFNLILFILWASPLAHSRNIPHNAKTTLLNVADSIQKTHQVLNFNQNNLKQQQQHKSYVSSLSSSSTLSLQLHSRASIHKSSHADYKSLTLSRLDRDSARVKFIVTQLDPNFNAEKLSGPIISGTSQGSGEYFSRLGIGEPPSQAYMVLDTGSDISWVQCAPCADCYRQADPIFEPTSSASYTPLTCEANQCKSLDLSQCHNGNCLYEVSYGDGSYTVGDFVTETVTIGATSVQNIAIGCGHNNEGLFVGAAGLLGLGGGPLSFPAQLNTTSFSYCLVDRDSDLVSTLEFDSPFSRNAVTAPLRRNRQLDTFYYVGLVGISVGGELLPIPETSFQVDATGSGGIIVDSGTAVTRLQSDVYDIVRDAFVNGTKDLPETNGVSLFDTCYDLSAKTSVEVPTVAFHFGEGKVLVMPAKNYLVPVDSVGTFCFAFAPTTSSLSIIGNIQQQGTRVSFDIGNSLIGFTPNSC* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0267 471 Gene3D Acid Proteases 112 293 IPR021109 -
Tpr1g0267 471 SUPERFAMILY Acid proteases 130 471 IPR021109 -
Tpr1g0267 471 Pfam Xylanase inhibitor N-terminal 136 288 IPR032861 -
Tpr1g0267 471 ProSiteProfiles Peptidase family A1 domain profile. 136 467 IPR033121 -
Tpr1g0267 471 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 11 471 - -
Tpr1g0267 471 Pfam Xylanase inhibitor C-terminal 317 467 IPR032799 -
Tpr1g0267 471 Gene3D Acid Proteases 294 471 IPR021109 -
Tpr1g0267 471 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 151 162 IPR001969 GO:0004190|GO:0006508
Tpr1g0267 471 PANTHER ASPARTYL PROTEASES 11 471 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0267 Tpr-Chr1 2240925 2243011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0267 126 471 Miscellaneous Gene Families AT1G77480 28.608 2.50e-23 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0267 1 2240925 2243011 Tpr1g0267 1 2240925 2243011 ECH