Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0249 ATGGCAAGCCATGGTTCATCATTTTCGAGCCTCCGAACCTATCTCCAAGCCGTCGCTCACACTCCTTCTCGCTTCGCTCGTCGCGGTTTCTCCGTCTCAACTTCATATGAAGAAATGAGCCGCGTTCGAGCCAGGTCCGGTACCAGCATGCGCAAGACACTCCGATGGTTCGACCTTGTCGGCTTTGGTATCGGCGGAATGGTCGGCGCCGGAGTTTTCGTAACAACCGGTCACGCCAGTCGCGTTTTCGCCGGTCCTGCTGTTGTTCTATCTTACGCCATTGCTGGTTTCTGCGCTCTGTTATCAGCTTTCTGTTACACTGAGTTCGCCGTTGATATGCCTGTCGCCGGCGGTGCTTTTAGCTACCTTCGCGTCACCTTCGGTGAATTTGCTGCGTTTATAACCGGCGCAAATCTGATCATGGATTACGTGATGTCCAATGCCGCCGTTGCTAGAGGTTTTACGGCGTATTTCGGCACCACAATCGGTATTTCCTCCGATAAATGGAGGATCACGGTTCCTTCTTTTCCTAAAGGATTTAATCAAATAGACATGGTCGCTGTTGTAGTCGTTTTACTCATCACCATCGTTATCTGCTACAGTACGAGGGAAAGTTCAGTGGTGAATATGATATTGACGGGGTTGCACATATTGTTCATAGTATTTGTGATAGTGATAGGTTTTTGGAAAGGTAGTTGGAAGAATTTTACAAACTCGTCTAATTCGGAGAATCCGTCGGGTTTTTTTCCGTTTGGTGCTGCTGGTGTGTTTAATGGTGCAGCAGCGGTTTATTTAAGCTATATTGGTTATGATGCTGTTTCAACAATGGCGGAAGAAGTGAAAGAACCTGTTAAAGATATTCCTATTGGTGTTTCTGGATCTGTAATTATCGTTACTATTCTTTATTGTCTCATGGCTGCTTCAATGTGCATGCTTCTTCCCTACGATATGATTGATCCTGAGGCACCGTTTTCAGCAGCGTTTAAATCTGACGGCTGGGGATGGGCGTCAAGAGTAATAGGAGTGGGGGCCAGTTTTGGAATATTGACATCATTGATAGTGGCTATGTTGGGTCAGGCTCGTTATATGTGTGTTATTGGACGTTCTAATGTGGTCCCTGCTTGGTTTGCTAAGGTCCACCCAAAGACCTCAACTCCTGTCAACGCCTCTGCTTTTCTTGGGATATTCACAGCAGCAATTGCACTTTTCACTGATCTTGATGTTCTTCTCAATCTTGTGTCAATTGGAACACTCTTTGTTTTCTACATGGTGGCAAATGCTGTGGTCTATAGACGTTATGTGGCAGCAGGAACAACAAATCCATGGCCAACAGTTTCTTTTCTCGTATCATTTTCATTCACTTCCATCATGTTTACCCTTATTTGGAAATGTGTACCATCAGGGGTAGCAAAAGCAGTGATGTTAAGTGCTTGTGGTGTGGTTGCTGTAGCAATATTGCAACTGTTCCATTTCACTGTCCCTCAAGCTAGGAAGCCAGAATTTTGGGGTGTACCACTTATGCCATGGATACCAGCTACATCAATTTTTTTGAATTTGTTTTTGCTTGGATCACTTGATGGGCCATCCTATGTTAGATTTGGAGTCTTTTCTGCTGTTGCAGTGCTCTTTTATGTGCTCTACAGTGTTCATGCTAGCTTTGATGCTGAAGGAGATGGTTCTCTAAGTCAAAAGAATGTTGAAGTCCATATGGAGTCAAAAGAAGAAAGTGTGGACCAAAGTTTCAAAGTTTAG 1752 0.4469 MASHGSSFSSLRTYLQAVAHTPSRFARRGFSVSTSYEEMSRVRARSGTSMRKTLRWFDLVGFGIGGMVGAGVFVTTGHASRVFAGPAVVLSYAIAGFCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGEFAAFITGANLIMDYVMSNAAVARGFTAYFGTTIGISSDKWRITVPSFPKGFNQIDMVAVVVVLLITIVICYSTRESSVVNMILTGLHILFIVFVIVIGFWKGSWKNFTNSSNSENPSGFFPFGAAGVFNGAAAVYLSYIGYDAVSTMAEEVKEPVKDIPIGVSGSVIIVTILYCLMAASMCMLLPYDMIDPEAPFSAAFKSDGWGWASRVIGVGASFGILTSLIVAMLGQARYMCVIGRSNVVPAWFAKVHPKTSTPVNASAFLGIFTAAIALFTDLDVLLNLVSIGTLFVFYMVANAVVYRRYVAAGTTNPWPTVSFLVSFSFTSIMFTLIWKCVPSGVAKAVMLSACGVVAVAILQLFHFTVPQARKPEFWGVPLMPWIPATSIFLNLFLLGSLDGPSYVRFGVFSAVAVLFYVLYSVHASFDAEGDGSLSQKNVEVHMESKEESVDQSFKV* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0249 583 PIRSF AA_transporter 489 569 - -
Tpr1g0249 583 PIRSF AA_transporter 35 501 - -
Tpr1g0249 583 PANTHER AMINO ACID/POLYAMINE TRANSPORTER I, CATIONIC AMINO ACID TRANSPORTER-RELATED 3 573 - -
Tpr1g0249 583 Pfam C-terminus of AA_permease 502 552 IPR029485 -
Tpr1g0249 583 Gene3D Amino acid/polyamine transporter I 49 488 - -
Tpr1g0249 583 Pfam Amino acid permease 54 472 IPR002293 GO:0016020|GO:0022857|GO:0055085
Tpr1g0249 583 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 3 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0249 Tpr-Chr1 2041824 2054051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0249 141 567 Organic Solute Cotransporters AT3G10600 75.000 0.0 657
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0249 1 2041824 2054051 Tpr1g0249 1 2041824 2054051 ECH