Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90961g00005 ATGGTGGTGATCCAAGAAAGTGATCCCTATGTTCATTTGTCCGAAACGGAAGATGAAGATATTGATGAGGCGGCGGGGGCGGAAGACGAAAGCATAGACTATGAGGATCTGAAGAAGCGCATGTGGAAGGACCGTGTCCTTCTCCAGAAGATGAAGGAGAAGCGTAACATGGACGAACCGGATAGCCAAGAAGCCAAACAAGAAGCGTCAAGGAAGAAAAAGATGTCTAGGGCACAAGATTCTGTCCTCAAATACATGGTCAAGATCATGGAGGTTTGCAAAGCTCGTGGCTTCGTCTATGGCATCGTCCCCGAAAAAGGTAAGCCAGTTACTGGTAGCTCGGATAGCTTAAGAGAATGGTGGAAGGATGATATTCGATTTGACCAAACTGCCCCTACAGCAATAGCAAAGTATCTACCACTAATTGAAAAGGGAGAGTTAGATGAGTCTTCAAGCATACACCTTCTCCAAGATCTTCAAGACACAACACTCGGATCTCTTCTTTCAGCGTTGATGCAACACTGTGTTCCTCCACAAAGGAGATACCCTCTCGAGAGAGGCGTGGCCCCACCATGGTGGCCCAATGGGTCAGAATTATGGTGGGGCGAACAGGGCCTTCTGGCCCAAGAACACGGCCCACCACCCTATAAGAAGCCCCATGACTTGAAGAAGGCATGGAAGGTTTCCGTTTTGGCTTCCGTTATAAAACACATGTCCCCTGATTTGGAGAAATTGAGAAAGCTTGTGACTCAATCAAAGACCTTGCAAGACAAGATGACTGCTAAAGATAGTGCTACTTGGTCCAAAGTTGTGAACCAAGAAGAAGCTTTGTTGAAACTAACCAACAAGTGTCTCAAGATTTCGCCTTCTTCGTCTAGCCACGAGGAGAATAATGATCGTAAGGAAGATGGTGAAGTCTTTGAATCCTCCCCAGTAAGCTCTGTTAATAATTCTCTTGATCATATTTTGTTCGGTAGCGGTGGTAGCAGCGGCAGTAGTAGCGGCAGAAATGAAAAAAGAAAGTGTGATTTTGATAGTAATAATAATAGTAATAGCTTTGTGCACAAACTGTTTTTTGCATGTCAAAACGCAGATTGTCCACAAAGCGATTTGTCTTTGGGATTTAAAGACAAAAATTCAAGAATGGATCACGAATCGCTGTGCGCTTTTCGTGGCGCGATTCTTGAGCATCAGGGAAGTAACAGTAGTGATGAAAATTCGAAAGCTTTTCATGATTATCTGTCGAGCGAGGCGAGAATAACGAGTGTTGGTGATTGGATGAACATAGAAGTAGCTAAGGCGAATAACAACAACAATAACAATAGTAGTTTTGGTGATACCGATTTTGGTGATGTTGATATTATGAATGGAATGGAAGAGATTATTATTCCGGGGGAAGGTTTTGGTGAGGACAATAATGTAGGGTTGTGGCTGGATGAGATTGAAGATTGTGAGTTGCTTGCGGCATTGGAAATGGTTAAAGCTAGTAGCGTGATGGATTCCACTCATAATAATCCGCCATTAATAGAGCATCATGATCTTATTTCCCCACATGGCGGCCATCATCTTGATGAAGAAGAAGCAACTACTTCATCACTTTGGGACTAA 1608 0.4366 MVVIQESDPYVHLSETEDEDIDEAAGAEDESIDYEDLKKRMWKDRVLLQKMKEKRNMDEPDSQEAKQEASRKKKMSRAQDSVLKYMVKIMEVCKARGFVYGIVPEKGKPVTGSSDSLREWWKDDIRFDQTAPTAIAKYLPLIEKGELDESSSIHLLQDLQDTTLGSLLSALMQHCVPPQRRYPLERGVAPPWWPNGSELWWGEQGLLAQEHGPPPYKKPHDLKKAWKVSVLASVIKHMSPDLEKLRKLVTQSKTLQDKMTAKDSATWSKVVNQEEALLKLTNKCLKISPSSSSHEENNDRKEDGEVFESSPVSSVNNSLDHILFGSGGSSGSSSGRNEKRKCDFDSNNNSNSFVHKLFFACQNADCPQSDLSLGFKDKNSRMDHESLCAFRGAILEHQGSNSSDENSKAFHDYLSSEARITSVGDWMNIEVAKANNNNNNNSSFGDTDFGDVDIMNGMEEIIIPGEGFGEDNNVGLWLDEIEDCELLAALEMVKASSVMDSTHNNPPLIEHHDLISPHGGHHLDEEEATTSSLWD 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90961g00005 535 MobiDBLite consensus disorder prediction 513 535 - -
Stsc90961g00005 535 MobiDBLite consensus disorder prediction 13 29 - -
Stsc90961g00005 535 MobiDBLite consensus disorder prediction 288 313 - -
Stsc90961g00005 535 MobiDBLite consensus disorder prediction 514 529 - -
Stsc90961g00005 535 MobiDBLite consensus disorder prediction 51 76 - -
Stsc90961g00005 535 MobiDBLite consensus disorder prediction 1 29 - -
Stsc90961g00005 535 FunFam Ethylene insensitive 3 family protein 64 145 - -
Stsc90961g00005 535 SUPERFAMILY DNA-binding domain of EIN3-like 153 278 IPR023278 GO:0003700|GO:0005634
Stsc90961g00005 535 FunFam Ethylene insensitive 3-like 1 147 284 - -
Stsc90961g00005 535 MobiDBLite consensus disorder prediction 293 307 - -
Stsc90961g00005 535 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 15 440 IPR006957 GO:0003700|GO:0005634
Stsc90961g00005 535 Pfam Ethylene insensitive 3 35 275 IPR047091 GO:0003700
Stsc90961g00005 535 Gene3D - 145 284 IPR023278 GO:0003700|GO:0005634
Stsc90961g00005 535 Gene3D - 64 144 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90961g00005 Stsc-Chr90961 45966 47913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90961g00005 30 400 EIL Transcription Factor Family AT5G65100 51.294 2.94e-132 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Stsc90961g00005 EIN3 7.5e-116 No_clan