Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90761g00013 ATGAAGAGGGTTCATAATCAGAATCAGAAATGGCCTTCCCCGATAATGATGCGACTCATCGGTTTGTGCATCCTGTCCACAATGATCCTCTCCGTGCTCTTTTCCCTCACCCTCGTCCTCCGAGATCCTCCCTCCGACGCCGTCCCCATATCTGTGCCCCAACACCAACTCCCTCTCTCTCGTTGGAGTGAGGATGGTGAAAGAGATAAACTGCTTGGTGGGCTGCTAGCAGCTGGATTGGATGAAACATCTTGCGTAAGCAGATATGATTATGATAGGGTCATTAATCGCAAAGGATTATCGGCAAAACCTTCTTCTTACCTCATTTCTAGATTAAGAAAATATGAAGCACTCCACAGAGAATGTGGACCATATACTGAATCATACAATACAACAGTGAAAGATCTAAGCTCCGGTATTGGAAGCCAGTCGAATTCGGGTGGTTGTAAATATCTGGTGTGGATTTCATATAGCGGCTTAGGGAATAGGATCTTGTCCATTGCTTCCGCATTCCTCTATGCTCTCCTCACCAACCGTGTTCTCTTGCTTGATGATGATATGACTCATCTCTTTTGCGACCCCTTCCCACATTCTTCCTGGTTCCTTCCTCCCCATTTCCCTCTTCGCTCTCAATTCCATCATTTCAATCAGAAATCTGCTCATTCTTATGGCAAAATGCTCAAGGATAAACCACTTACAACTTCTCATTTTCCTTCTTTTCTCTACCTACACCTAGCACATGACTACGACCATCAAGATAAGCTATTCTTCTGCGATGAACACCAACCTTTTCTTCATCAGGTACCTTGGTTATTACTCAGAACAGATAATTACTTCGTTCCATCGCTATTCTTGATGCCGTCCTTTCAGCACCAACTCAATGACCTATTTCCAAATACGGAAACTGTTTTCCACTTCCTAGCTAGGTATCTGTTCCACCCCACAAACAGGGTATGGGGACTAGTCCTTAGATACTATCAAGCTTATTTAGCTAATGTTAATCAGAGAGTAGGCGTACAGATTAGAGTGTTTGACACTGGAACAGGTCCCTTTCAACATGTATTGGATCAAATCCTAGCTTGTGTTTTCAAGGAGAATATATTACCCGATGTTGACAGGAAGCAGGCTACTAATACTTCATCGGGAAAGCCCAAGTCCAAAGCACTACTCATCACATCCTTAAGCTCTGGTTATTTCGAAAAGCTCAGAGATATGTACTGGGAATTCCCCACCACCACAGCAGAAGTAGTAGGCGTTTTCCAGCCAAGCCATGAAGGATATCAACAAACTGAGAAGCAGATGCACAACCAAAAAGCTTTGGCCGAAATGTATCTCTTAAGCTTAACCGATGTTCTGGTCACTAGCGCATGGTCTACTTTCGGCTATGTGGCACAGGGAATGGGAGGTTTAAAACCATGGATACTATACAAGCCTGAGAATAAAACTGCTCCGGATCCTCCTTGTCAACGCGCTATGTCGATGGAGCCATGTTTCCATGCTCCTCCCTTTTATGACTGTAAGGCTAAGAAAGGAATAGACACTGGTAAAATCGTTCCACATGTTAGGCACTGTGAGGATATGAGCTGGGGTCTTAAACTTGTACATAATTAG 1611 0.4395 MKRVHNQNQKWPSPIMMRLIGLCILSTMILSVLFSLTLVLRDPPSDAVPISVPQHQLPLSRWSEDGERDKLLGGLLAAGLDETSCVSRYDYDRVINRKGLSAKPSSYLISRLRKYEALHRECGPYTESYNTTVKDLSSGIGSQSNSGGCKYLVWISYSGLGNRILSIASAFLYALLTNRVLLLDDDMTHLFCDPFPHSSWFLPPHFPLRSQFHHFNQKSAHSYGKMLKDKPLTTSHFPSFLYLHLAHDYDHQDKLFFCDEHQPFLHQVPWLLLRTDNYFVPSLFLMPSFQHQLNDLFPNTETVFHFLARYLFHPTNRVWGLVLRYYQAYLANVNQRVGVQIRVFDTGTGPFQHVLDQILACVFKENILPDVDRKQATNTSSGKPKSKALLITSLSSGYFEKLRDMYWEFPTTTAEVVGVFQPSHEGYQQTEKQMHNQKALAEMYLLSLTDVLVTSAWSTFGYVAQGMGGLKPWILYKPENKTAPDPPCQRAMSMEPCFHAPPFYDCKAKKGIDTGKIVPHVRHCEDMSWGLKLVHN 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90761g00013 536 Pfam Xyloglucan fucosyltransferase 67 507 IPR004938 GO:0008107|GO:0016020|GO:0042546
Stsc90761g00013 536 PANTHER FUCOSYLTRANSFERASE 2-RELATED 24 535 IPR004938 GO:0008107|GO:0016020|GO:0042546
Stsc90761g00013 536 FunFam Galactoside 2-alpha-L-fucosyltransferase 147 196 - -
Stsc90761g00013 536 Coils Coil 534 536 - -
Stsc90761g00013 536 Gene3D - 147 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90761g00013 Stsc-Chr90761 50554 52416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90761g00013 10 534 Xyloglucan Fucosyltransferase1 AT2G03220 58.692 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90761g00013 K13681 - gmx:100803305 770.77