Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90637g00005 ATGGATAAATTGAGTTTCAAGAGATTTAGAACACTATTGATTGTGGGTTCCATCACCTTCCCTATTTTATTCACATTTACTCTGATGCACCAACACTCTATCTATGATCTTGTTGAGGGAGTTTCCAAGATTAACATATTGGCTGCAAGGGCCCAGAATGCTACTACCAATCTCTTAAAAGAAGGGCCACAAAATGCTCTAGTTCAAGTTGGGGAAGGAAAAGATCAGAATGTGATAGATAAGATGTTGGGAGGCAAACAACAAACCGGTTTACCTGAAATATCAGAAGAACAAGCTCAGACTTCAACAGTCGCAGATATTGCTTCGAAGAATCATTCATTTGAAGATGAGAAGAATGATTCATCCCTATCTACATTTGGCTTTGCTGGTGACAGACTCCTTGATGGACTATTAGTTTCCACATTTGATGAAGGATCATGTGTTAGTAGGTATCAGTCTTACTTGTACCGCAAACCTTCCCCTCACAAACCTTCTGCATATCTCATATCCAAGCTACGAAAGTATGAACATCTTCATAGAAGTTGTGGACCACATACCAAATCCTATGACAAAATTATGGGAAAGAGCACAAAATCTAGCAAAAGTGGTGCAGGTGAGAAGTGCAAATACCTTGTCTGGACAGCTTCCAATGGCCTAGGGAACAGGATGCTAACTCTGGTTGCAGCATTTCTTTATGCTATCCTCACAGACCGTGTTCTACTAGTCAAATTTGGAGATGATATGTCTGATCTCTTTTGTGAGCCTTTTGCTGATTCCTCATGGTTATTGCCCAGGAACTTTCGATATTGGAAGGATCAGAAACATATTGAAACGCATGAAAGCATGCTAATGAATAAGGGATACAATGAAAAGGAGATTTTTCCATCATTTCTTGTTCTTAATCTACAACACAGCCATGACGGTCATAATAACTTTTTCCATTGTGATCATAGTCAAAATCTTCTCCAGAGAATTCCAGTGCTGATTTTATGGTCAGATCAATATTTTGCCCCATCTCTTTTTCTGATTCCATCCTTTAGACAAGAATTAAGCAAAATATTCCCTGAGAAAGACACGATTTTTCACCATCTAGGACGATACCTTTTCCACCCATCAAATAAGGCATGGGAATTAATCAACAAGCTCTATCAGGTGCACTTAGCCAAGGCAAATGAGAAGATTGGCCTGCAGATTAGAGTATTCAATACACATAAAGCATCCCATCAAACTATTATCAATGAAATTATAGCATGCGTCGTCAGGCACAAGCTTCTTCCTGAAATAGACATGGAAAAGTCTACAACTTCTCCTTTGAAGAAGCATGCTACGATCTCAAAAGCTGTACTAGTAGCATCATTATACTCTGAATATGGTGAGAAGCTGAGAAATATGTACATGAGGAACACAACAGTGAACGGGGAAGTGATAAGAGTTTCTCAGCCAAGTCATGAAGAGCGTCAAAAGTCCAAAGATGGCATGCACAACATTAAGGCATGGAGTGAAATATATTTGTTGAGTTTGTGTGATGCATTGGTTGCTAGTCCCAAGTCCACTTTTGGATACGTTGCTCATGGTCTTGGAGGTTTGAAGCCGTGGATTCTGAAGAGGCCATACGGGGAAACAGTCCCAGAGCCTCCTTGTGAACGAGCCATGTCCATGGAGCCTTGTTTCCATTATCCTCCCAAGTATGAATGTAGTGCCAATAGAACTATTGACTTCACTTCCCTCTTTCATCACATGGAGCATTGTGAAGATGTACGTAACGGATTAAGGCTGTTCAATGATAATCGCTAG 1794 0.4013 MDKLSFKRFRTLLIVGSITFPILFTFTLMHQHSIYDLVEGVSKINILAARAQNATTNLLKEGPQNALVQVGEGKDQNVIDKMLGGKQQTGLPEISEEQAQTSTVADIASKNHSFEDEKNDSSLSTFGFAGDRLLDGLLVSTFDEGSCVSRYQSYLYRKPSPHKPSAYLISKLRKYEHLHRSCGPHTKSYDKIMGKSTKSSKSGAGEKCKYLVWTASNGLGNRMLTLVAAFLYAILTDRVLLVKFGDDMSDLFCEPFADSSWLLPRNFRYWKDQKHIETHESMLMNKGYNEKEIFPSFLVLNLQHSHDGHNNFFHCDHSQNLLQRIPVLILWSDQYFAPSLFLIPSFRQELSKIFPEKDTIFHHLGRYLFHPSNKAWELINKLYQVHLAKANEKIGLQIRVFNTHKASHQTIINEIIACVVRHKLLPEIDMEKSTTSPLKKHATISKAVLVASLYSEYGEKLRNMYMRNTTVNGEVIRVSQPSHEERQKSKDGMHNIKAWSEIYLLSLCDALVASPKSTFGYVAHGLGGLKPWILKRPYGETVPEPPCERAMSMEPCFHYPPKYECSANRTIDFTSLFHHMEHCEDVRNGLRLFNDNR 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90637g00005 597 PANTHER FUCOSYLTRANSFERASE 2-RELATED 54 594 IPR004938 GO:0008107|GO:0016020|GO:0042546
Stsc90637g00005 597 Gene3D - 206 324 - -
Stsc90637g00005 597 Gene3D - 377 536 - -
Stsc90637g00005 597 FunFam Galactoside 2-alpha-L-fucosyltransferase 206 257 - -
Stsc90637g00005 597 Pfam Xyloglucan fucosyltransferase 127 565 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90637g00005 Stsc-Chr90637 24024 26366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90637g00005 131 592 Xyloglucan Fucosyltransferase1 AT2G03220 51.812 6.71e-167 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90637g00005 K13681 - gmx:100799776 820.076