Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60699g00001 ATGCAAGACCCAACAACAGTATTTCAACCCATCAAACCCCAATTTCCAGAACAAGAACAACTTAAATGCCCTCGTTGCGACTCCACAAACACCAAATTCTGCTACTACAACAACTACAACCTCTCACAGCCACGCCATTTTTGTAAGAATTGCAGAAGGTATTGGACCAAAGGAGTTTCCACTCCAGCACAGGCTGCTTCGTCCGGTCCAGAACCTGACTCGGCTCAGGTTTATCCCGCCCCGCCAGCCGTGGCTGATCAAGGCCAACAAAGGTTGCTTGACATTGGTGGAAGCTTCAGTTCCCTATTGGCATCAACTAGCCATTTGGGAAGCCTATTGGAGGGTCTGAATTCAAGTGGATCAAGTCTTAAAATGGTGCAAATGAATGAGTTCGGGGTGAATTCGGCCGGTTCTGGTGCGCCGCCCATGAGCTCGAATTCTAGTAGGAATCCAGGGTTGGATGTTGAGAGCAATGGCAATAATGAAGAGAGCTTCCTGAGTATGCATAATGGTGATTCAAGCTGTTGGAATAATGGTAGCAATGGATGGTCTAACCTTGCAATATTTACACCAGGATCAAGCTTTCAGTAG 591 0.4704 MQDPTTVFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGVSTPAQAASSGPEPDSAQVYPAPPAVADQGQQRLLDIGGSFSSLLASTSHLGSLLEGLNSSGSSLKMVQMNEFGVNSAGSGAPPMSSNSSRNPGLDVESNGNNEESFLSMHNGDSSCWNNGSNGWSNLAIFTPGSSFQ 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60699g00001 196 Pfam Dof domain, zinc finger 19 58 IPR003851 GO:0003677|GO:0006355
Stsc60699g00001 196 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 59 IPR045174 GO:0003700|GO:0006355
Stsc60699g00001 196 MobiDBLite consensus disorder prediction 62 81 - -
Stsc60699g00001 196 ProSiteProfiles Zinc finger Dof-type profile. 21 75 IPR003851 GO:0003677|GO:0006355
Stsc60699g00001 196 MobiDBLite consensus disorder prediction 134 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60699g00001 Stsc-Chr60699 2307 3819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60699g00001 6 113 C2C2-Dof Transcription Factor Family AT1G51700 45.390 7.57e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Stsc60699g00001 zf-Dof 1.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60699g00001 - - gmx:100798927 228.794