Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc343g00002 ATGGATAAATTGAGTTTCAAGAGATTTAGAACACTATTGATTGTGGGTTCCATCACCTTCCCAATTTTATTCACATTTACTCTGATGCACCAACACTCTATCTATGATCTTGTTGAGGGAGTTTCCAAGATTAACATATTGGCTGCAAGGGCCCAGAATGCTACTACCAATGTCTTAAAAGAAGGTCCACAAAATGCTAGAGTTCAAGTTGGGGAAGGAAAAGATCACAATGTGGTAGATAAGATGTTGGGAGGCAAACAACAAACCAGTTTACCTGAAATATCAGAAGAACAAGCTCAGATTTCAACAATAGCAGATATTGCTTCGAAGAATCATTCATTTGAAGATGAGAAGAATGATTCATCCCTATCTACATTTGGCTTTGCTGGTGACAGACTCCTTGATGGACTATTGGTTTCCACATTTGATGAAGGATCATGTGTTAGCAAGTATCAGTCTCACTTGTACCGCAAACCTTCCCCTCACAAACCTTCTGCATATCTGATATCCAAGCTACGAAAGTATGAACATCTTCATAGAAGTTGTGGACCACATACCAAATCCTATGACAAAATTATGGGAAAGAGCACAAAATCCAGCAAAAGTGGTGCAGGTGAGAAGTGCAAATACCTTGTCTGGACAGCTTCCAATGGCCTAGGGAACAGGATGCTAACTCTGGTTGCAGCATTTCTTTATGCTATCCTCACAGACCGTGTTCTATTAGTCAAATTTGGAGATGATATGTCTGATCTCTTTTGTGAGCCANNNNNNNNNNTTGCTGATTCCTCATGGTTATTGCCCAGGAACTTTCGATATTGGAAGGATCAGAAACATATTGAAACGCATGAAAGCATGCTAATGAATAAGGGATACAATGAAAAAGAGATTTTTCCATCATTTCTTATTCTTAATCTACAACACAGCCATGATGGTCATAATAACTTTTTCCATTGTGATCATAGTCAAAATCTTCTCCAGAGAATTCCAGTGCTGATTTTATGGTCAGATCAATATTTTGCCCCATCTCTTTTTCTGATTCCATCCTTTAGACAAGACTTAAGCAAGATATTCCCCGAGAAAGACACAATTTTTCACCATCTAGGACGTTACCTTTTCCACCCATCAAATAAGGCATGGGAATTAATCAACAAGTTCTATCAAGCGCACTTAGCCAAGGCAAATGAGAAGATTGGCCTGCAGATTAGAGTATTCAATACACATAAAGCATCCCATCAAACTATTATGAATGAAATTTTAGCCTGCGTCGTCAGGAACAAGCTTCTTCCTGAAATAGACATGGAAAAGTCGACAACTTCTCCTTTGAAGAAGCATGCTACGACCTCAAAAGCTGTACTAGTAGCATCATTATACTCTGAATATGGTGAGAAGCTGAGAAATATGTACATGAGGAACACAACAGTGACCGGGGAAGTGATAAGAGTTTCTCAGCCAAGTCATGAAGAGCGTCAAAAGTCCAATGATGGCATGCACAACATTAAGGCATGGAGTGAAATATATTTGTTGAGTTTGTGTGATGCATTGGTTACTAGTCCCAAGTCCACTTTTGGATATGTTTCTCATGGTCTTGGAGGTTTGAAGCCGTGGATTCTGAAGAGGCCATACGGGGAAACAGTCCCAGAGCCTCCATGTGAACGAGCCATGTCCATGGAGCCTTGTTTCCATTACCCTCCCAAGCATGAATGTGGTGCCAATAGAACTATTGACTTCACTTCCCTCTTTCATCACATGGAGCATTGTGAAGATGTACATAACGGATTAAGGCTGATCAATGATAATCGCTAG 1803 0.3982 MDKLSFKRFRTLLIVGSITFPILFTFTLMHQHSIYDLVEGVSKINILAARAQNATTNVLKEGPQNARVQVGEGKDHNVVDKMLGGKQQTSLPEISEEQAQISTIADIASKNHSFEDEKNDSSLSTFGFAGDRLLDGLLVSTFDEGSCVSKYQSHLYRKPSPHKPSAYLISKLRKYEHLHRSCGPHTKSYDKIMGKSTKSSKSGAGEKCKYLVWTASNGLGNRMLTLVAAFLYAILTDRVLLVKFGDDMSDLFCEPXXXXADSSWLLPRNFRYWKDQKHIETHESMLMNKGYNEKEIFPSFLILNLQHSHDGHNNFFHCDHSQNLLQRIPVLILWSDQYFAPSLFLIPSFRQDLSKIFPEKDTIFHHLGRYLFHPSNKAWELINKFYQAHLAKANEKIGLQIRVFNTHKASHQTIMNEILACVVRNKLLPEIDMEKSTTSPLKKHATTSKAVLVASLYSEYGEKLRNMYMRNTTVTGEVIRVSQPSHEERQKSNDGMHNIKAWSEIYLLSLCDALVTSPKSTFGYVSHGLGGLKPWILKRPYGETVPEPPCERAMSMEPCFHYPPKHECGANRTIDFTSLFHHMEHCEDVHNGLRLINDNR 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc343g00002 600 Gene3D - 206 327 - -
Stsc343g00002 600 Gene3D - 380 538 - -
Stsc343g00002 600 PANTHER FUCOSYLTRANSFERASE 2-RELATED 66 597 IPR004938 GO:0008107|GO:0016020|GO:0042546
Stsc343g00002 600 FunFam Galactoside 2-alpha-L-fucosyltransferase 206 257 - -
Stsc343g00002 600 Pfam Xyloglucan fucosyltransferase 127 568 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc343g00002 Stsc-Chr343 6578 10282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc343g00002 131 596 Xyloglucan Fucosyltransferase1 AT2G03220 51.163 1.58e-164 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc343g00002 K13681 - gmx:100799776 817.764