Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc319g00006 ATGAATCATGTGAGTGTTTTGGTTAAAGGGTGGACTTGGATTCCTGATAATTTGGATAATCTCTACTCTTGCAATTGTGGGTTGAGCTGTTTGTGGACCAAATCTAACGTTCTTGCTGACAAGCCTGATGCTGTGTTGTTTGAAACTACCACCCCTCCTCTTCAGAGACGTGTGGGAGAACCACTCCGTGTATACATGGATCTTGAAGCTGGCCGGAAGAGATCAGGTCTAGAGGAAATTTTTATTAGTTATCATGCCGGAGACGATGTACAGGCAACCTATGCTGGTGCGCTATTCCACAATGGTCGAAACTATCACGTCTCCAATAATAAAAACAATGATGTACTTGTATATTGGTCCTCATCACGATGCCTTCCTCAGAGGGACACAATTGCGAAGAAACTCCTCAAGCTGCTGCCTCACCACTCATTCGGAAGGTGCTTAAATAATGTTGGTGGTCCAGACATGGCTCTTTCTATGTACCCTGAGTGCGCGAATGATGCCAATTTAACCCCAAAATGGTGGGATCACTTACATTGTGCTATGTCTCACTACAAGTTTGTTCTTGCAATTGAGAACACTTGGACAGAGAGTTACGTGACGGAGAAGTTGTTTTATGCCTTGGACTCTGGTGCAGTTCCTATCTATTTTGGTGCTCCGAATGTCATGGATTTTGTTCCTCCGCATTCAATTATAGATGGCAGAAAGTTCAGCTCATTCGAAGAGTTAGCTTCATACGTGAAGTCTGTAGCTAACAACCCAGTAGCCTATGCGGAATACCATGCATGGAGACGGTGCGGCATACTTGGAAATTATGTAAAAACTCGAGCGGCGAGCCTTGACACATTGCCATGCCGGTTATGCGCTGCTGTTAGCCGAAAAGGGGGAAGAAATGCAAGAAGCTAG 906 0.4492 MNHVSVLVKGWTWIPDNLDNLYSCNCGLSCLWTKSNVLADKPDAVLFETTTPPLQRRVGEPLRVYMDLEAGRKRSGLEEIFISYHAGDDVQATYAGALFHNGRNYHVSNNKNNDVLVYWSSSRCLPQRDTIAKKLLKLLPHHSFGRCLNNVGGPDMALSMYPECANDANLTPKWWDHLHCAMSHYKFVLAIENTWTESYVTEKLFYALDSGAVPIYFGAPNVMDFVPPHSIIDGRKFSSFEELASYVKSVANNPVAYAEYHAWRRCGILGNYVKTRAASLDTLPCRLCAAVSRKGGRNARS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc319g00006 301 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 293 - -
Stsc319g00006 301 FunFam Alpha-(1,4)-fucosyltransferase 63 269 - -
Stsc319g00006 301 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 114 294 IPR001503 GO:0006486|GO:0008417|GO:0016020
Stsc319g00006 301 Gene3D - 69 268 IPR038577 -
Stsc319g00006 301 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 6 293 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc319g00006 Stsc-Chr319 50167 52900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc319g00006 1 299 Xyloglucan Fucosyltransferase1 AT1G71990 78.930 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc319g00006 K14412 - gmx:100791990 574.318