Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30768g00008 ATGGACAAGTTGGGATTGAGTTCCAAGAGATTCACAACATTCTTTGTGGTGATTATCATATCTTTACCTATTGCTATACTTGTTACCTCAATTTGCAGAAAACCAAGCTTTGCTATCTTTGAGGCCAATAAGGAACTTCACAATGAGAACAACCTTGGAAAACAAAGAGATAATGTCAACAACACTATGTCACAGGTAGTGAAAGGGAACATCCAAAATGGTACAACTATTGAAGGAAGAGCTGTAGATGCAGGGTCAAGAAGTGCTTCTTCCATCGAAAGTTCAACATATGACACTACTGAGAATGTTGATGACAAGCTTTTTGATGGACTTTTGGCTTCTGGTTTTGATGAAGCATCATGTATAAGCAAGCTTGAGTCTCATCGTTACCGGCGCAAAGCTTCTCCTGCTCACAAGCCTTCTCCATTTCTGCTATCCAAACTAAGAAACTATGAAAAGATTCATAGAAAGTGTGGACCTCACAGTATAGCTTACAACAAAAGCATGGTCAAGATTCTAAATTCCAAGAACCATGGTGATTCAAAGTGCAAATACATTGTATGGAGACCTGCAAATGGCTTAGGGAACCAAATGATAAGCATGGTAGCAACATTTCTATATGCTCTTCTGACAGATAGAGTTCTTCTTGTAAGATTTGGGAGTGACATGAATGACCTATTTTGTGAGCCATTTCTCAAATCAACTTGGTTATTGCCTAAGGACTCTCCATTTTGGTATGAAAACAATTGTGAAACATATCAAGCATTGCTAGAGAGGGATAAGGCTAATAACAATTCAAAGGAAGATTTAGATTTGCCTTCTGTTCTGTTTATCAATCTACAACACACAAGCAATGATCCTGAGAAATTTTTTCACTGTGACCATAGTCAAGATCTTCTCAAGAAGGTTCCCCTGTTGATCCTTCAATCAGATCAATATTTTGTCCCTTCATTGTTCATAACCCCATCTTTCAGCCTCAAGATCACCAAGATGTTCCCGGAAAAGGACACGGTTTTCTACCATCTGGCGCGGTACCTTTTCCACCCTTCGAACGAGGCGTGGGGACTAATCAGCAGATTCTACGACGCATACTTGGCGAAAGCCGATGAAAGAATCGGAATCCAGGTCAGAGTTTTTAGCCCTTCCACCACTCCACACCAAGCAATGATGGACCTACTCTTGAGCTGCACAATAAGCAACAAGGTACTTCCACAAACAGTTGGTGTGCAAAACTCATCAATGGCTTCTTCTTCTTCTACTACTACTACTTATACAAGGAAAAACCATACCCTAAAAGCTGTTATTGTGGCATCATTACATCCATATTATGCTGACAATTTAAGGACAATGTACCTTAAGAACCCTACAATCAATGGTGAAGTTGTTGGAGTGTATCAACCTAGTCATGAGGAACAACAAAAGTTTAAGGATAACATGCAAAACATGAAGGCATGGAGTGAAATGTATCTACTAAGTTTATGTGATGTGTTGGTAACTACTTCATTATCTACATTTGGGTATGTGGCTCAAGGCTTAGGGGGATTGAAGCCATGGCAACTTTTCAAGCTAGTTAGTAATGACACATATTTTCCACCTTGTGTAAGGGATTTCTCAATGGAGCCTTGTTTGCATGTTCCTCCAAAGCATCATTGCAATGGAACACTTATTCATGATTTTCTCTCTTCTTTCCATCATGTTGGAAAATGCAAGGATTATCCTTATGGGGTTGTTGCAATTGAGAAGATGGGAATGAGTAGCGAAAAAGTTGAAAAGTATCTTCTTGTGTTTTTCATAGCTATCCCTTTGGTTTTCATCACAGTCACCTCAATGTACAAAATCTCAAACAATCTTCCCCCTTTTGAGGGGTTTCAAAAGGTATTAGGAGGGAAATATCAGAATGTCACAGATGAATTTCTAAGTAAAGTAGTCCCAAATGCTACAAATAATAACAATAATAGCAGCTTGGGATTATTGGAAGGAAGAGGAATAATAGTCCAAAATATGACACATCAAAACTTAGGAGAAGGAGGAGAAGAAAAGAATAATAATACTCTTAAGGTTCTCCAAGGAAAAACTCAGAATAATTATACTGCTTCACAAGGAATAGCGACAGATGCAGGGCCAAGAGATGACTCGAAAAATCTTTCAACAAATAATTCAAATTCAACCACACATATTGAAAACCATGATGACAAATTTCTAGATGGACTTTTAGCTTCTCGATTTGATGAATTAACATGCTTAAGCAGGTATCAATCCTATTTATACCGCAAAGCTTCTCCACACAAGCCATCTCCATATCTGATATCTAAACTCAGAAACTATGAACAAATTCACAAAAAGTGTGGACCCAACACCAGAGCTTACAACAGAACCATGAGAAAAATCATAATCCCAAGTTCTTCCAAAACTCATCATAACCATCATCATTACAATGAAAATGTTGCTGCCACAACATGCAAATATGTTGTATGGTCACCTGCAAATGGATTGGGAAATAGAATGATTAGCATTGCATCCACATTTCTGTATGCTGTTCTCACAGAAAGAGTTTTGTTAGTAAGATTTGGACCTGACATGCATGGCCTATTCTGTGAACCATTTCAAGAATCCACTTGGATTTTGCCTAAGAATTCACCCTTTTGGAGCAATGAGAATGTTGAGACTGTGTTGGCTAAGGTGGACAAAGCTAGAAACTTGACTTTGGATCGATTATCATTACCTTCTGTCATGTTAATGAATCAACTACCTGAAAGCTTTTTTCACTGTGATCATCATCAAGAAGCTCTCAAGAAAGTTGCTGTCTTGATTATTCTGTCAGATCAGTATTTTGTGCCTTCTCTGTTTATGATTCCATCTTTTAGTGTTGATCTGAACAAGATGTTCCCGGAAAAGAATGCTGTTTTCCACCACGTCGGACGGTATCTTTTCCACCCTTCCAATGAGGCGTGGGGACCAATTAGCAGATTCTACGACGCATACTTGGCAAAAGCGGACGAAAGAATTGGCCTTCAGGTAAGAGTGTTTAAACCCAGTTCCACTCCTCATCAAGCAGTTTTGGACTTACTTTTAAGCTGTGCAATAAAGAACAAGATACTTCCAGAAATCGATACGCGAAATCCGGCTTCAAATGTGAAAAATACCAACCATACTCTAAAGGCTGTTCTTGTGGCATCTTTATATCCAGAATATGCTGAAAATTTGAGAACCATGTACCTTAGAGGACCAACTATTACAGGAGAAGTAATAGGAGTTTATCAACCAAGTCATGAAGAAAAGCAAAAGTTTAATGACAATGTGCACAACATAAAGGCATTGGTTGATATGTATCTGCTAAGTTTATGTGATGTGTTGGTGACTACTTCTTTGTCTACTTTTGGGTATGTGGCTCAAGGCTTTGGGGGTTTGAAGCCTTGGTTACTTTATAGGATAACAAGTAATGAGACACATTCTCCTGCTTGTGTTAGAGACTTGTCACCTGAGCCTTGTTTCCATTTTGCTCCTCAGCATCAATGTAAAGGGAAGTTCAAACAACATTTTAGTACTTCTTTCCCACATATGTTTGAATGCAAGGATTATTATCGCGGAGTGAAGCTTGTTGACGGTGGAGTAGATTAA 3618 0.3861 MDKLGLSSKRFTTFFVVIIISLPIAILVTSICRKPSFAIFEANKELHNENNLGKQRDNVNNTMSQVVKGNIQNGTTIEGRAVDAGSRSASSIESSTYDTTENVDDKLFDGLLASGFDEASCISKLESHRYRRKASPAHKPSPFLLSKLRNYEKIHRKCGPHSIAYNKSMVKILNSKNHGDSKCKYIVWRPANGLGNQMISMVATFLYALLTDRVLLVRFGSDMNDLFCEPFLKSTWLLPKDSPFWYENNCETYQALLERDKANNNSKEDLDLPSVLFINLQHTSNDPEKFFHCDHSQDLLKKVPLLILQSDQYFVPSLFITPSFSLKITKMFPEKDTVFYHLARYLFHPSNEAWGLISRFYDAYLAKADERIGIQVRVFSPSTTPHQAMMDLLLSCTISNKVLPQTVGVQNSSMASSSSTTTTYTRKNHTLKAVIVASLHPYYADNLRTMYLKNPTINGEVVGVYQPSHEEQQKFKDNMQNMKAWSEMYLLSLCDVLVTTSLSTFGYVAQGLGGLKPWQLFKLVSNDTYFPPCVRDFSMEPCLHVPPKHHCNGTLIHDFLSSFHHVGKCKDYPYGVVAIEKMGMSSEKVEKYLLVFFIAIPLVFITVTSMYKISNNLPPFEGFQKVLGGKYQNVTDEFLSKVVPNATNNNNNSSLGLLEGRGIIVQNMTHQNLGEGGEEKNNNTLKVLQGKTQNNYTASQGIATDAGPRDDSKNLSTNNSNSTTHIENHDDKFLDGLLASRFDELTCLSRYQSYLYRKASPHKPSPYLISKLRNYEQIHKKCGPNTRAYNRTMRKIIIPSSSKTHHNHHHYNENVAATTCKYVVWSPANGLGNRMISIASTFLYAVLTERVLLVRFGPDMHGLFCEPFQESTWILPKNSPFWSNENVETVLAKVDKARNLTLDRLSLPSVMLMNQLPESFFHCDHHQEALKKVAVLIILSDQYFVPSLFMIPSFSVDLNKMFPEKNAVFHHVGRYLFHPSNEAWGPISRFYDAYLAKADERIGLQVRVFKPSSTPHQAVLDLLLSCAIKNKILPEIDTRNPASNVKNTNHTLKAVLVASLYPEYAENLRTMYLRGPTITGEVIGVYQPSHEEKQKFNDNVHNIKALVDMYLLSLCDVLVTTSLSTFGYVAQGFGGLKPWLLYRITSNETHSPACVRDLSPEPCFHFAPQHQCKGKFKQHFSTSFPHMFECKDYYRGVKLVDGGVD 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30768g00008 1205 Gene3D - 988 1138 - -
Stsc30768g00008 1205 PANTHER FUCOSYLTRANSFERASE 2-RELATED 33 576 IPR004938 GO:0008107|GO:0016020|GO:0042546
Stsc30768g00008 1205 MobiDBLite consensus disorder prediction 700 728 - -
Stsc30768g00008 1205 Gene3D - 180 235 - -
Stsc30768g00008 1205 Gene3D - 817 871 - -
Stsc30768g00008 1205 FunFam Galactoside 2-alpha-L-fucosyltransferase 181 232 - -
Stsc30768g00008 1205 MobiDBLite consensus disorder prediction 710 724 - -
Stsc30768g00008 1205 FunFam Galactoside 2-alpha-L-fucosyltransferase 818 869 - -
Stsc30768g00008 1205 Pfam Xyloglucan fucosyltransferase 100 551 IPR004938 GO:0008107|GO:0016020|GO:0042546
Stsc30768g00008 1205 Pfam Xyloglucan fucosyltransferase 725 1173 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30768g00008 Stsc-Chr30768 27029 34858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30768g00008 85 576 Xyloglucan Fucosyltransferase1 AT2G03220 46.092 1.69e-143 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30768g00008 K13681 - gmx:100809919 683.33