Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30376g00005 ATGGGTCTCGTGCAGAACCCGCGAGGCTCGAGAACCGAGTCAACTCACGAAGGCTTACCTGTTTCATCGGTTCAATCGGGTTGGGTTCCGAAGCGGAGATGTTCGACGAATCTAATGCCTCTTGTGGTTGCACTTGTGGTCATTGCGGAGATCGCGTTTTTGGGAAGGCTTGACATGGCGGAGAACGCTGCTATGGTCTCTGACTTCTTCTACCGCTCACGTGCTGCGTCCGGGGTGGATGGTGCTGATGATCTGGATTTTGGTTTGCTTGTTGGTAGACATGATAGAAAGAATTCGGAATCGGAGAGTTGCCAAGAGTGGTTGGAGAGAGAAGATTCTGTAACTTATGAAAGGGATTTTAACAAGGAACCTGTTTATGTCTCTGGAGCTGACCAGGAGTGGAAATCATGTGCTGTGGGATGCAAATTTGGTTATGATGGGGATAGGAAACCTGATGCTGCATTTGGGTTACCTCAACCATCTGGTATAGCTAGTGTGTTACGATCGATGGAATCCGCACAATACTATTCAGAGAACAATCTTGACATGGCACGACGGAGGGGATATAAAATTATAATGACAACCAGTCTATCATCTGATGTTCCTGTTGGATATTTCTCATGGGCTGAGTATGACATCATGGCACCAGTGCAGCCAAAAACTGAAGCCGCTCTGGCAGCTGCATTCATTTCCAATTGTGGTGCTCGAAATTTTCGGTTGCAAGCTCTTGAAGCCCTGGAAAAAGAAAACATCAAGATTGATTCTTATGGCGGTTGTCATAGGAATCGTGATGGAAGAGTGGACAAAGTGGAAGCCCTGAAGCGGTACAAATTTAGCTTAGCCTTTGAAAATTCTAATGAGGAGGATTATGTAACTGAGAAATTCTTCCAATCCCTTGTTGCTGGAACTGTCCCTGTGGTTGTTGGTGCTCCAAATATTCAGGATTTCGCTCCTGCTCCCGGGTCAATTTTACATATTAAAGAGATAGAAGATGTTGAGTCTGTTGCCAAAACCATGAGACATCTAGCAGAAAATCCAGAAGCATTTAATCAATCACTGAGGTGGAAGTACGAGGGCCCCTCTGATTCCTTCAAGGCCCTTGTGGATATGGCAGCCGTGCATTCGTCTTGTCGACTTTGTATTCACTTGGCCACGACTATTAGAGAGAAGGAAGAGAAGAGCCCGGGCTTCAAGAAGCGTCCTTGCAAGTGCACTCGGGGTTCGGAAACTGTATATCATATCTATGTGAGGGAAAGAGGAAGATTTGAAATGGAGTCCATTTACTTGAGGTCAAACAGTTTAACTCTGGAAGCATTGAAGAATGCTATTCTTTTGAAGTTCAGATCCCTGAATCATGAACCTGTATGGAAGCCAGAAAGACCTAAAGTTCTAAGCAGAGGCAGCGAACTAAAAATTCACAAAATATACCCGGTCGGCTTGACGCAGAGGCAAGCTCTTTATTCCTTCAGATTCAACGGGGATGCGGATTTCAGATCTCACTTGGAAAGCAATCCCTGTGCCAAGTTCGAAGTCATTTTTGTGTAG 1545 0.4537 MGLVQNPRGSRTESTHEGLPVSSVQSGWVPKRRCSTNLMPLVVALVVIAEIAFLGRLDMAENAAMVSDFFYRSRAASGVDGADDLDFGLLVGRHDRKNSESESCQEWLEREDSVTYERDFNKEPVYVSGADQEWKSCAVGCKFGYDGDRKPDAAFGLPQPSGIASVLRSMESAQYYSENNLDMARRRGYKIIMTTSLSSDVPVGYFSWAEYDIMAPVQPKTEAALAAAFISNCGARNFRLQALEALEKENIKIDSYGGCHRNRDGRVDKVEALKRYKFSLAFENSNEEDYVTEKFFQSLVAGTVPVVVGAPNIQDFAPAPGSILHIKEIEDVESVAKTMRHLAENPEAFNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATTIREKEEKSPGFKKRPCKCTRGSETVYHIYVRERGRFEMESIYLRSNSLTLEALKNAILLKFRSLNHEPVWKPERPKVLSRGSELKIHKIYPVGLTQRQALYSFRFNGDADFRSHLESNPCAKFEVIFV 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30376g00005 514 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 224 388 IPR001503 GO:0006486|GO:0008417|GO:0016020
Stsc30376g00005 514 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 126 390 - -
Stsc30376g00005 514 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 45 464 IPR001503 GO:0006486|GO:0008417|GO:0016020
Stsc30376g00005 514 MobiDBLite consensus disorder prediction 1 22 - -
Stsc30376g00005 514 Gene3D - 168 363 IPR038577 -
Stsc30376g00005 514 MobiDBLite consensus disorder prediction 7 22 - -
Stsc30376g00005 514 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 171 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30376g00005 Stsc-Chr30376 28524 33909 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30376g00005 1 514 Xyloglucan Fucosyltransferase1 AT1G49710 66.539 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30376g00005 K00753 - gmx:100776065 836.639