Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30210g00009 ATGCTGATGCTCCCACCCAAACCCATCAACACCATCACCATCTCCATCTTCCTCCTCTTCATCTTCTTCCTCTTCTTCTTCTTCTCCGGCTTCTTCCACTTCCCCTCTACCCTTTCCCCCACCACCACCACAACCAGTAGAAGCGCTCGATTCACACCCTCCGCCGCCGCCAACGCGGCCGCATCGGAGCCCTTCACTGATCTGGTTGGCGCGTTCAGAAGGTGGGACTCGAAGGTGGGGTGCCAGCGGTTCAGGGAGAAATGGGGCAATGGGTTGGCGCTGAATCAGTCAAAGGTTGCAGCTTTGCAAGGGTTCGGTAAGTGTAAGGGTTTGAAGATGAATCATGTGAGTGTTTTGGTTAAAGGGTGGACTTGGATTCCTGATAATTTGGATAATCTATACTCTTGCAATTGTGGGTTGAGCTGCTTGTGGACCAAATCCAACGTTCTTGCTGACAAGCCTGATGCTGTGCTGTTTGAAACTACCACCCCTCCTCTTCAGAGACGTGTGGGAGAACCACTTCGTGTATACATGGATCTTGAAGCTGGCCGGAAGAGATCAGGTCGAGAGGAAATTTTTATCAGTTATCATGCTGAGGATGATGTACAGGCAACCTATGCTGGTGCACTATTCCACAATGGTCGAAACTATCACGTCTCCGATAATAAAAACAATGATGTACTCGTATATTGGTCCTCATCACGATGCCTTCCTCAGAGGGACACAATTGCGAAGAAACTCCTCAAGTTGCTGCCTCACCACTCATTCGGAAGGTGCTTAAATAATGTTGGTGGTTCAGACATGGCTCTTTCTATGTACCCTGAGTGCGCGAATGACGCCGATTTAACCCCAAAATGGTGGGATCACTTACATTGTGCTATGTCTCACTACAAGTTTGTTCTTGCAATAGAGAACACTTGGACAGAGAGTTACGTGACGGAGAAGTTGTTTTATGCCTTGGACTCTGGTGCAGTTCCTATCTATTTTGGTGCTCCGAACGTCATGGATTTTGTTCCTCCGCATTCAATTATAGATGGCAGAAAGTTCAGCTCATTCGAAGAGTTAGCTTCATATGTGAAGTCTGTAGCTAACAACCCAGTAGCCTACGCGGAATACCATGCATGGAGGCGGTGCGGCATACTTGGAAACTATGTAAAAACTCGAGCGGTGAGCCTTGACACATTGCCATGCCGGTTATGCGCTGCTGTTAGCCGAAAAGGTGGAAGAAATGCAAGAAGCTAG 1242 0.4823 MLMLPPKPINTITISIFLLFIFFLFFFFSGFFHFPSTLSPTTTTTSRSARFTPSAAANAAASEPFTDLVGAFRRWDSKVGCQRFREKWGNGLALNQSKVAALQGFGKCKGLKMNHVSVLVKGWTWIPDNLDNLYSCNCGLSCLWTKSNVLADKPDAVLFETTTPPLQRRVGEPLRVYMDLEAGRKRSGREEIFISYHAEDDVQATYAGALFHNGRNYHVSDNKNNDVLVYWSSSRCLPQRDTIAKKLLKLLPHHSFGRCLNNVGGSDMALSMYPECANDADLTPKWWDHLHCAMSHYKFVLAIENTWTESYVTEKLFYALDSGAVPIYFGAPNVMDFVPPHSIIDGRKFSSFEELASYVKSVANNPVAYAEYHAWRRCGILGNYVKTRAVSLDTLPCRLCAAVSRKGGRNARS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30210g00009 413 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 226 406 IPR001503 GO:0006486|GO:0008417|GO:0016020
Stsc30210g00009 413 Gene3D - 181 380 IPR038577 -
Stsc30210g00009 413 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 105 405 - -
Stsc30210g00009 413 PIRSF FucT_plant 3 413 IPR017177 -
Stsc30210g00009 413 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 113 405 IPR001503 GO:0006486|GO:0008417|GO:0016020
Stsc30210g00009 413 FunFam Alpha-(1,4)-fucosyltransferase 175 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30210g00009 Stsc-Chr30210 59680 62817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30210g00009 4 411 Xyloglucan Fucosyltransferase1 AT1G71990 66.667 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30210g00009 K14412 - gmx:100792300 654.825