Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271914g00026 ATGAAGAGGGTTCATCATCAGAATCAGATAATGATGCGCCTCATCGGTTTGTGCGTCTTCTCCACAATGATCCTGGCCGTCGTCTTCTCACTCACCCTCGTCCTCCGAAATCCTCCCTCGGACGCCGTCCCCATATCTGTGCCCCAGCACTCAAGAGATAAACTGCTTGGTGGGCTGGTAGCAGCTGGATTGGATGAAACATCTTGCGTAAGCAGATATGATACGGTCATTAATCGCAAAGGATTATCGGCACAACCTTCTTCTTACCTCATTTCTAAATTAAGAAAATATGAAGCACTCCACAGAGAATGTGAATCGTACAATACAACATCGTCGCATTGTAAATATCTAGTGTTGATCTCATACAGCGGGTTAGGGAATAGGATGTTGGCCATTGCTTCTGCATTCCTCTATGCTCTCCTCACCAACCGTGTTCTCTTGCTTGATCCTGGTCCTGATGATATCACTCATCTCTTCTGCGACCCCTTCCCACATTCTTCCTGGTTCCTTCCTCCCCATTTCCCTCTTCACCCCCAATTCCACCATTTCAATCACAATTCTCCTCGCTCTTATGGCAACATGCTCAAGCAGGATAAACCACTTACAACTTCTCAACTTCCTTCTTTTCTCTACCTACATCTAGCCCATGACTACGACCATCAAGATAAGCTATTCTTCTGCGATGAACACCAACTTTTTCTTCATCAGGTACCTTGGTTATTACTCAGAACAGATAATTACTTCGTTCCATCCCTATTCTTGATGCCGTCTTTTCAGCAAGAACTCAATCACCTATTTCCAAATAGGGAAACTGTTTTCCATTTCTTAGCTAGGTATCTGTTCCACCCCACAAACAGGGTATGGGGACTAGTTGTTAGATACTATCAAGCTTATTTAGCTAATGTTGATCAGAGAGTAGGCCTACAGATTAGAGTGTTTCACACTGGAACAGGTCCCTTTCAACATGTATTGGATCAAATCTTAGCTTGTGTTTTCAAGGAGAATCTATTACCCCATCTTAACACGAAGCAGCCTACTATTACTTCATCGGGAAAGCCCAAGTCCAAAGCAGTACTCGTGACATCCTTAAGCTCTGGTTATTTCGAAAAGCTCAGAGATATGTACTGGGAATTCCCCACCACCACAGGAGAAGTAGTAGGCGTTTTCCAGCCAAGCCACGAAGGATATCAACAAACCGAGAAGCAGATGCACAACCAAAAAGCTTGGGCCGAAATGTATCTCTTAAGCTTAACCGACGTTTTGGTCACTAGCGCGTGGTCTACTTTCGGCTATGTAGCACAGGGGATGGGAGGTTTAAAACCATGGATACTATACAAGCCTGAGAATAAAACTGCTCCGGATCCTCCTTGTCAACGCGCTATGTCGATGGAGCCATGCTTCCATGCTCCTCCCTTTTATGACTGTAAGGCTAAGAGAGGAATAGACACTGGTAAAATCGTTCCACATGTTAGGCACTGTGAGGATATGAGCTGGGGTCTTAAACTTGTAAATGATTAG 1518 0.4453 MKRVHHQNQIMMRLIGLCVFSTMILAVVFSLTLVLRNPPSDAVPISVPQHSRDKLLGGLVAAGLDETSCVSRYDTVINRKGLSAQPSSYLISKLRKYEALHRECESYNTTSSHCKYLVLISYSGLGNRMLAIASAFLYALLTNRVLLLDPGPDDITHLFCDPFPHSSWFLPPHFPLHPQFHHFNHNSPRSYGNMLKQDKPLTTSQLPSFLYLHLAHDYDHQDKLFFCDEHQLFLHQVPWLLLRTDNYFVPSLFLMPSFQQELNHLFPNRETVFHFLARYLFHPTNRVWGLVVRYYQAYLANVDQRVGLQIRVFHTGTGPFQHVLDQILACVFKENLLPHLNTKQPTITSSGKPKSKAVLVTSLSSGYFEKLRDMYWEFPTTTGEVVGVFQPSHEGYQQTEKQMHNQKAWAEMYLLSLTDVLVTSAWSTFGYVAQGMGGLKPWILYKPENKTAPDPPCQRAMSMEPCFHAPPFYDCKAKRGIDTGKIVPHVRHCEDMSWGLKLVND 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271914g00026 505 Gene3D - 111 169 - -
Stsc271914g00026 505 FunFam Galactoside 2-alpha-L-fucosyltransferase 112 164 - -
Stsc271914g00026 505 Pfam Xyloglucan fucosyltransferase 50 476 IPR004938 GO:0008107|GO:0016020|GO:0042546
Stsc271914g00026 505 PANTHER FUCOSYLTRANSFERASE 2-RELATED 16 504 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271914g00026 Stsc-Chr271914 115918 117518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271914g00026 1 503 Xyloglucan Fucosyltransferase1 AT2G03220 57.036 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271914g00026 K13681 - gmx:100803305 721.079