Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271869g00014 ATGACAAAAATTATGATGTCAAATTCTTCCAAAACTGGTAACCATGTTTCTGCTACAATGTGCAAATATGTTATATGGTCACCTATATGGGGATTGGGAAATAGAATGATTAGCATTGCATCCACATTTCTGTATGCTGTTCTCACAGGAAGAGTTTTGTTAGTAAAATTTGAACCTGACATGCATGGCCTATTCTGTGAACCATTTCAAGAAACCACTTGGATTTTGCCCAAGAATTCACCCATTTGGAACTATGAGAATGTTGAGACATATAAAAGTGTGTTAGCTAAGGTGGACAAGGCTAGAAACTTGACAATGGATAAATTATTATTACCTTCTGTTCTGTTTATTAATCTACTATATTTAAGAGGATATCCAGAAAGGTATTTTCATTGTGATGTTAATCAAGAAGCTCTCAAGAAAGTTGATGTCTTGATTGTTCAGTCAGGTCATTACTTTGTGCCTTCTCTGTTTATGACTCCGTCTTTTAGTCTCGAACTGAACAAAATGTTTCCGGAAAAGAATGCCGTTTTCCACCACGTCGGACGGTATCTTTTCCACCCTTCGAACGAGGTGTGGGGACAAATTACCAGATTCTATGACGCATACTTGGCGAAAGCAGATGAGAGGATTGGCCTTCAGGTAAGAGTGTTTAAGGCTACTCCGAAACAATCAGTTATGGACTTACTTTTAAGCTGTGTTATAAGGAATAAGATACTTCCAGAGATCGATACGCGAAATTCGGCTTCAAATGCGAAAAATACCAACCATATTCTAAAGGCTGTTCTTGTGACATCTTTATATCCAGAATTTGCTGAGAATTTGAGAACCATGTACTTCAGAGGAGCAACTATCACACGAGAAGTAATAGGAGTTTATCAACCAAGTCATGAGGAAGAGCAAAAGATGAATAACAATGTGCACAACATAAAAGCATTGGTGGATATGTATCTACTAAGTTTATGTGATGTGTTGGTGACTACTTCTGCCTCTACTTTTGGTTATGTGGCTCATGGTTTTAGGGGCTTGAAGCCTTGGTTACTTTCTAACCCAACAAGTAATAATGAGACAGATTTTCCAGCTTGTGTTAGAGACTTTTCACCTGAGCCTTGTTTCCATTTTGCTCCTCAGTATCAATGTAATGGGATTCGCAAACAACATTTTGGTGCTTCTTTCCCAAATATCTTTGAATGTAATGATTATAATGGTCTCAAGCTTGGTGACTCTGATGTCTAA 1236 0.377 MTKIMMSNSSKTGNHVSATMCKYVIWSPIWGLGNRMISIASTFLYAVLTGRVLLVKFEPDMHGLFCEPFQETTWILPKNSPIWNYENVETYKSVLAKVDKARNLTMDKLLLPSVLFINLLYLRGYPERYFHCDVNQEALKKVDVLIVQSGHYFVPSLFMTPSFSLELNKMFPEKNAVFHHVGRYLFHPSNEVWGQITRFYDAYLAKADERIGLQVRVFKATPKQSVMDLLLSCVIRNKILPEIDTRNSASNAKNTNHILKAVLVTSLYPEFAENLRTMYFRGATITREVIGVYQPSHEEEQKMNNNVHNIKALVDMYLLSLCDVLVTTSASTFGYVAHGFRGLKPWLLSNPTSNNETDFPACVRDFSPEPCFHFAPQYQCNGIRKQHFGASFPNIFECNDYNGLKLGDSDV 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271869g00014 411 PANTHER FUCOSYLTRANSFERASE 2-RELATED 14 408 IPR004938 GO:0008107|GO:0016020|GO:0042546
Stsc271869g00014 411 Pfam Xyloglucan fucosyltransferase 11 380 IPR004938 GO:0008107|GO:0016020|GO:0042546
Stsc271869g00014 411 Gene3D - 190 357 - -
Stsc271869g00014 411 Gene3D - 18 74 - -
Stsc271869g00014 411 FunFam Galactoside 2-alpha-L-fucosyltransferase 19 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271869g00014 Stsc-Chr271869 68502 70084 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271869g00014 21 406 Xyloglucan Fucosyltransferase1 AT2G03220 48.974 2.26e-119 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271869g00014 K13681 - gmx:100818288 467.618