Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271869g00013 ATGACAAAAGTTATGATGTCAAATTCTTCCAAAACTGGTAACCATGTTTCTGCTACAATGTGCAAATATGTTATATGGTCACCGGCAAATGGATTGGGAAACAGAATGATTAGCATTGCATCCACATTTCTGTATGCTGTTCTCACAGAAAGAGTTCTGTTAGTAAGATTTGAACCTGACATGCATGGCCTATTCTGTGAACCATTTCAAGAATCCACTTGGGTTTTGCCAATGGATTCACCTTTTTGGAAGAATGAGAATCTTGAGACATATGAAAGTGTGGTGTTAGCAAGAAACTTGACATTGGATGATCAGTTATCATTGCCTTCTGTTCTGTTTATTGATCTACAGTATAGACCAGAGGATCCTGAAAGATTTTTTCATTGTGGTCATAATCAAGAAGCTCTCAACAAAGTTGATGTCTTGATTATTCAGTCAGATCAGTACTTTGTGCCTTCTCTGTTTATGATTCAATCTTTTAGTCTTGATCTGAACAAGATGTTCCCGGAGAAGGATGCTGTTTTCCACCACGTCGGACGGTACCTTTTCCACCCTTCGAACGAGGCGTGGGGACAAATTACCAGATTCTATGACGCATACTTGGCGAAAGCTAACGAGAGGATTGGCCTTCAGGTAAGAGTGTTTAACCCCGCTTCCACTCCGCAACAAGCAGTTATGAACTTACTTTTAAGCTGTGCCATTGAGAACAAGATACTTCCAGAAATCGATACGCGAAATCCGGTTTCAAATGCGAAAAATACCAACCACACTCTAAAGGCTGTTCTTGTGACATCTTTATATCCAGAGTATGCTGAAAATTTGAGAACCATGTACCTTAGAGGAGCAACTATCACAGGAGAAGTAATAGGAGTTTATCAACCAAGTCATGAACAAGAGCAAAAGTTTAATGACAATGTTCACAACATAAAAGCATTGGTGGATATGTATCTACTAAGTTTATGTGATGTGTTGGTGACTACTTCTGTGTCTACTTTTGGTTATGTGGCTCATGGATTTAGGGGTTTGAAGCCTTGGTTACTTTATAGGCTAACAAGTGATGAGACACATTCTCCAGCTTGTGTTAGAGACTTGTCACCTGAGCCTTGTTACCATTTTGCCCCTCAGCATCAATGTAATGGTTTGAAGCCTGAACAACATTTTGGTACTTCTTTCCCACATATCTTTGAATGCAAGGATTTTAATCGTGGAGTGAAGCTTGTTGATGGTGTTTAG 1233 0.3958 MTKVMMSNSSKTGNHVSATMCKYVIWSPANGLGNRMISIASTFLYAVLTERVLLVRFEPDMHGLFCEPFQESTWVLPMDSPFWKNENLETYESVVLARNLTLDDQLSLPSVLFIDLQYRPEDPERFFHCGHNQEALNKVDVLIIQSDQYFVPSLFMIQSFSLDLNKMFPEKDAVFHHVGRYLFHPSNEAWGQITRFYDAYLAKANERIGLQVRVFNPASTPQQAVMNLLLSCAIENKILPEIDTRNPVSNAKNTNHTLKAVLVTSLYPEYAENLRTMYLRGATITGEVIGVYQPSHEQEQKFNDNVHNIKALVDMYLLSLCDVLVTTSVSTFGYVAHGFRGLKPWLLYRLTSDETHSPACVRDLSPEPCYHFAPQHQCNGLKPEQHFGTSFPHIFECKDFNRGVKLVDGV 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271869g00013 410 PANTHER FUCOSYLTRANSFERASE 2-RELATED 13 408 IPR004938 GO:0008107|GO:0016020|GO:0042546
Stsc271869g00013 410 Gene3D - 191 349 - -
Stsc271869g00013 410 Pfam Xyloglucan fucosyltransferase 11 378 IPR004938 GO:0008107|GO:0016020|GO:0042546
Stsc271869g00013 410 Gene3D - 18 72 - -
Stsc271869g00013 410 FunFam Galactoside 2-alpha-L-fucosyltransferase 19 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271869g00013 Stsc-Chr271869 50200 51789 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271869g00013 21 407 Xyloglucan Fucosyltransferase1 AT2G03220 49.105 2.35e-123 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271869g00013 K13681 - gmx:100818288 509.22