Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271869g00012 ATGGGATTGAGTAGTGAAAAAGTTGAAAAGTATCTTCTTGTGTTCTTCATAGCAATCCCTTTGGTTTTCATCACAGTCACCTCAATGTACAAAATCTCAAACAATCTTCCCCCTTTTGAGGGGTTTCACAAGGTATTATTAGGAGGGAAATATCATCAGAATGTTACAGATGAATTTCTAAGTAAAGTAGTCCCAAATGCTACAAATAATAATAGCTTGGGATTATTGGAAGGAAGAGGAATAGTCCAAAATATGACACATCAAAACTTAGGAGAAGGAAGAGAAGAAAAGAATAATACTGGTGAGGTGCACCAAGGGAAAACTCAGAATAATTATACTGCTTCACAAGGAATAGCGACAGATGAAGCGCCAACAAATGAATCCAAAAACCTTTCAACAAATGATTCAAATTCAACCACACATATAGAAAACCATGATGACAAATTTCTGGATGGACTTTTAGCTTCTGGATTTGATGAATCAAGATGCCTAAGCAGATACCAATCCCATTTATACCGCAAAGCTTCTCCTTACAAGCCATCTCCATATTTGATCTCTAAACTCAGAAACTATGAACAGCTTCACAAAAAGTGTGGACCCAACACTAGATCTTACAACAGAACCATGACAAAAATCATAATCCCAAGTTCTTCCAAAACTCATCATCATAACCATCATCATTACAATGATAATGTTGCTGCCACAACATGCAAATATGTTGTATGGTCACCTGCAAATGGATTGGGAAATAGAATGATTAGCATTGCAGCCACATTTCTGTATGCTGTTCTCACAGAAAGAGTTTTGTTAGTAAGATTTGGACCTGACATGCATGGCCTTTTCTGTGAACCATTTCAAGAATCCACTTGGATTTTGCCTAAGAATTCACCATTTTGGAGGAATGAGAATGTTGAGACATATCAAAGTGTGTTAGCTAAGGTGGACAAAGGTAGAAACTTGACATTGTTGGGTCAATTATCATTACCTTCTGTCATGTTTATGAATCCACAACATAGAAGTGATGATCCTCAAAGCTTTTTCCACTGTGATCATCATCAAGAAGCTCTCAAGAAAGTTGCTGTGTTGATTGTTGAGTCAGATCAGTACTTTGTACCTTCTCTGTTCATGACTCCATCTTTTAGCTTTGATTTGAACAACATGTTTCCGGAAAAGGATGCTGTTTTCCACCATGTCGGACGGTACCTTTTCCACCCGTCGAATGAGGCGTGGGGGCAAATTACCAGATTCTACGACGCATACTTGGCAAAAGCAGACGAGAGAATTGGCTTTCAGGTAAGAGTGTTTAAACCCAGTTCCACTCCTCATCAAGCAATTATGAACTTACTTTTAAGCTGTGCAATAGAGAACAAGATACTTCCAAAAATCGATACGCGAAATTCGGCTTCAAATGCAAAAAATACCAACCATACTCTAAAGGCTGTTCTTGTGGCATCTTTATATCCAGAATATGCTGAGAATTTGAGAACCATGTACCTTAGAGGAGCAACTATCACAGGAGAAGTAATAGGAGTTTATCAACCAAGTCATGAACAAGAGCAAAAGTTTAATGACAATGTTCACAACATAAAGGCATTGGTGGATATGTATCTACTAAGTTTATGTGATGTGTTGGTGACTACTTCTTTGTCCACTTTTGGTTATGTGGCTCATGGTTTTAGGGGTTTGAAGCCTTGGTTACTTTATAGGCTAACAAGTAATGGGACACATTTTCCAGCTTGTGTTAGAGACTTGTCACCTGAGCCTTGTTTCCATTTTGCTCCTCAGCATCAATGTAATGGGAAGTTGAAACAACATTTTAGTACTTCTTTCCCACATATGTTTCAATGCAAGGATTATTATCGTGGTGTGAAGCTTGTTGATGGTGTAGTAGATTAA 1896 0.3792 MGLSSEKVEKYLLVFFIAIPLVFITVTSMYKISNNLPPFEGFHKVLLGGKYHQNVTDEFLSKVVPNATNNNSLGLLEGRGIVQNMTHQNLGEGREEKNNTGEVHQGKTQNNYTASQGIATDEAPTNESKNLSTNDSNSTTHIENHDDKFLDGLLASGFDESRCLSRYQSHLYRKASPYKPSPYLISKLRNYEQLHKKCGPNTRSYNRTMTKIIIPSSSKTHHHNHHHYNDNVAATTCKYVVWSPANGLGNRMISIAATFLYAVLTERVLLVRFGPDMHGLFCEPFQESTWILPKNSPFWRNENVETYQSVLAKVDKGRNLTLLGQLSLPSVMFMNPQHRSDDPQSFFHCDHHQEALKKVAVLIVESDQYFVPSLFMTPSFSFDLNNMFPEKDAVFHHVGRYLFHPSNEAWGQITRFYDAYLAKADERIGFQVRVFKPSSTPHQAIMNLLLSCAIENKILPKIDTRNSASNAKNTNHTLKAVLVASLYPEYAENLRTMYLRGATITGEVIGVYQPSHEQEQKFNDNVHNIKALVDMYLLSLCDVLVTTSLSTFGYVAHGFRGLKPWLLYRLTSNGTHFPACVRDLSPEPCFHFAPQHQCNGKLKQHFSTSFPHMFQCKDYYRGVKLVDGVVD 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271869g00012 631 Gene3D - 411 566 - -
Stsc271869g00012 631 MobiDBLite consensus disorder prediction 103 139 - -
Stsc271869g00012 631 FunFam Galactoside 2-alpha-L-fucosyltransferase 235 286 - -
Stsc271869g00012 631 PANTHER FUCOSYLTRANSFERASE 2-RELATED 36 627 IPR004938 GO:0008107|GO:0016020|GO:0042546
Stsc271869g00012 631 Gene3D - 234 287 - -
Stsc271869g00012 631 Pfam Xyloglucan fucosyltransferase 141 598 IPR004938 GO:0008107|GO:0016020|GO:0042546
Stsc271869g00012 631 MobiDBLite consensus disorder prediction 92 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271869g00012 Stsc-Chr271869 43022 46532 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271869g00012 147 626 Xyloglucan Fucosyltransferase1 AT2G03220 49.275 3.73e-152 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271869g00012 K13681 - gmx:100818288 655.21