Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242160g00005 ATGGGAGAAATCGAAGAAATAGGAATTGATGTTTGCTCAGATATAGATGTTGATGATATTAGATGCCATAATATAGCGGAGAAAGATGTCAGTGATGAAGAGATTGAAGCAGAAGATTTGGAGAGGAGGATGTGGAAGGATCGAATCAAACTCAAAAGACTCAAGGAGAAACAAAAGATCGCAGCACAGCAAGCTGCAGAGAAGCAGAAGCCGAGGCATACCACTGATCAAGCTCGGAGGAAGAAGATGTCCAGAGCGCAAGATGGTATTCTTAAGTATATGCTGAAGCTTATGGAAGTCTGCAAAGCTCGTGGATTTGTGTATGGAATCATTCCTGAAAAAGGAAAACCGGTGAGTGGTTCCTNNNNNNNNNNCATTAGAGCTTGGTGGAAAGAGAAGGTAAAGTTCGATAAAAACGGCCCTGCTGCCATAGCAAAGTATGAAGCAGAGTGTCTTGCTATGAGTGAGGCTGAAAACAATCGAAACGGGAACTCTCAAAGCACTCTTCAAGACCTGCAAGATGCAACACTCGGGTCACTTTTATCTTCTTTAATGCAACATTGTGATCCTCCTCAGAGGAAGTATCCATTGGAAAAGGGTATTCCTCCACCTTGGTGGCCGACCGGGAAGGAAGATTGGTGGGTACAGTTAAATTTACCCCATAATCAGAGTCCTCCTTATAAGAAGCCGCATGATTTGAAAAAGATGTGGAAAGTGGGAGTGCTAACTGCTGTTATAAAGCACATGTCACCTGATATTGCAAAAATACGGAGGCATGTCCGTCAATCAAAGTGCTTGCAGGACAAGATGACAGCAAAGGAAAGCGCAATTTGGTTAGGGGTATTAAGTCGGGAAGAAGCTCTTATTAGGCAGTATAGTACTGATAATGGTACATCTGGAATAACAGACGTGCCACCTACTGTTCCTGCCGGAAGCAAGCAACCGGCCACTAGTAGTGATAGCAATTATGATGTTGAGGGTGTTGATGATGGTGCTGGTTCTGTTTCTTCTAAAGAAGATAGGAGAAATCAAGTTGTGGAAGCCGAACCATCAGATAACTCGCAAAAGCATTCTCTTAAAGAGAAAGATCAAGCTGAGAAACAATCCAGGAGAAAAAGGCCTCGATTGAGGTCAAATACCACGGACAAACTACCACCACAACCTAACAACGAAATTTTACAGGTTGAGCCGGTAAGCACTTTGCCCATTGCAAACCAGACAGGAGCTCAGGTGATTGGGCATATTCCTGGAAATGGAGGAGGTAATGATGCAGATACTTCTATGAGATTAGTGGATAAAGGACCTGATGTCCCAGCTCAACTACCAGCAACTGGATTTGATCATTTCTCGTATCTTCATCCGAACAACTTGGTTCCCTCTGAAAGCATGTATATGAGTGGAAGGCAATTGCACTATCCGGAGGTACAAAACCCCAACATGCATCAAGGAACTAGTTACGATATTTATAATCCGGTGGCAGGGTATGGACCTAGTCATGATGGACAGCAATTGCAGCCCGGAAATGATGAAGCAATGCAGCCGGAGAATGCAGTTTCTTTGCCACAAGAACATAATATGAAAGGGGATGAAATTACAGGAGGAGACTTGCAATATTTTGGCAAAGACGCGTTCCCCAATGAGCTCGACAGACCTATAGATCATTCTTTCTTTGGATCACCAATCAGTAGCATGTCGTTAGATTTTGGAGGATTCAACAGTTCACCACTCCATTTGGATGATTTCTTGGGTGATGATGAAATGATCCAGTACTTTGGAGCATAG 1782 0.4321 MGEIEEIGIDVCSDIDVDDIRCHNIAEKDVSDEEIEAEDLERRMWKDRIKLKRLKEKQKIAAQQAAEKQKPRHTTDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSXXXXIRAWWKEKVKFDKNGPAAIAKYEAECLAMSEAENNRNGNSQSTLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGIPPPWWPTGKEDWWVQLNLPHNQSPPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREEALIRQYSTDNGTSGITDVPPTVPAGSKQPATSSDSNYDVEGVDDGAGSVSSKEDRRNQVVEAEPSDNSQKHSLKEKDQAEKQSRRKRPRLRSNTTDKLPPQPNNEILQVEPVSTLPIANQTGAQVIGHIPGNGGGNDADTSMRLVDKGPDVPAQLPATGFDHFSYLHPNNLVPSESMYMSGRQLHYPEVQNPNMHQGTSYDIYNPVAGYGPSHDGQQLQPGNDEAMQPENAVSLPQEHNMKGDEITGGDLQYFGKDAFPNELDRPIDHSFFGSPISSMSLDFGGFNSSPLHLDDFLGDDEMIQYFGA 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242160g00005 593 MobiDBLite consensus disorder prediction 295 324 - -
Stsc242160g00005 593 MobiDBLite consensus disorder prediction 60 83 - -
Stsc242160g00005 593 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 15 580 IPR006957 GO:0003700|GO:0005634
Stsc242160g00005 593 Pfam Ethylene insensitive 3 38 286 IPR047091 GO:0003700
Stsc242160g00005 593 MobiDBLite consensus disorder prediction 333 370 - -
Stsc242160g00005 593 MobiDBLite consensus disorder prediction 69 83 - -
Stsc242160g00005 593 FunFam Ethylene insensitive 3-like 1 160 296 - -
Stsc242160g00005 593 MobiDBLite consensus disorder prediction 295 392 - -
Stsc242160g00005 593 Coils Coil 23 57 - -
Stsc242160g00005 593 SUPERFAMILY DNA-binding domain of EIN3-like 167 290 IPR023278 GO:0003700|GO:0005634
Stsc242160g00005 593 MobiDBLite consensus disorder prediction 474 513 - -
Stsc242160g00005 593 MobiDBLite consensus disorder prediction 410 436 - -
Stsc242160g00005 593 Gene3D - 73 149 IPR023278 GO:0003700|GO:0005634
Stsc242160g00005 593 Gene3D - 159 297 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242160g00005 Stsc-Chr242160 21757 24913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242160g00005 18 593 EIL Transcription Factor Family AT1G73730 53.345 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Stsc242160g00005 EIN3 1.9e-122 No_clan