LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc241734g00006	ATGGGAGAAATCGAAGAAATAGGAATTGATGTTTGCTCAGATATAGATGTTGATGATATTAGATGCCATAATATAGCGGAGAAAGATGTCAGTGATGAAGAGATTGAAGCGGAAGAATTGGAGAGGAGGATGTGGAAGGATCGAATCAAACTCAAAAGACTCAAGGAAAAACAGAAGATTGCAGCACAGCAAGCTGCAGAGAAGCAAAAGCCGAGGCATACCACTGATCAAGCTCGGAGGAAGAAGATGTCCAGAGCACAAGATGGTATTCTTAAGTATATGCTGAAGCTTATGGAAGTCTGCAAAGCTCGTGGATTTGTGTATGGAATCATTCCTGAAAAAGGAAAACCGGTGAGTGGTTCCTCTGATAATATTAGAGCTTGGTGGAAAGAGAAGGTAAAGTTCGATAAAAATGGCCCTGCTGCCATAGCAAAGTACGAAGCAGAGTGTCTTGCTATGAGTGAGGCCGAAAACAATCGAAATGGGAACTCTCAGAGCACTCTTCAAGACCTGCAAGATGCAACACTTGGATCACTTTTATCTTCTTTAATGCAACATTGTGATCCTCCTCAGAGGAAGTATCCATTGGAAAAGGGTATTCCTCCACCTTGGTGGCCAACCGGGAAGGAAGATTGGTGGGTACAGTTAAATTTACCCCATAATCAGAGTCCTCCTTATAAGAAGCCGCATGATTTGAAAAAGATGTGGAAAGTGGGAGTGCTAACTGCTGTTATAAAGCACATGTCACCTGATATTGCAAAAATAAGGAGGCATGTTCGTCAATCAAAGTGCTTGCAGGACAAGATGACAGCAAAGGAAAGCGCAATTTGGTTAGGTGTATTAAGTCGGGAAGAAGCTCTTATTAGGCAGTATAGTACTGATAATGGTACATCTGGAATAACAGACACACCACCTACTGTTCCTGCCGGAAACAAGCAACCGGCCACTAGTAGTGATAGCAATTATGATGTTGATGGTGTTGATGATGGTGCTGGTTCTGTTTCTTCTAAAGAAGATAGAAGAAATCAAGTTGTGGAAACTGAACCTTCAGATAACTCGCGAAGGAATTCTATTAAAGAGAAAGATCAAGCTGAGAAACAATCCAGGAAAAGAAAACCTCGATCGAGGTCAAATACCACTGACAAACTACCACCACAACCTAACAAGGAAGTTTTACAAGTTGAGCCGGTAACCACTTTACCCAATGTGAACCAGACAGGAGCTCTGATGGCTGGGCATATTCCTGGAAATGAAGGAGGCAATGATGCAGATACTTCTATGAGACTAGTGGATAAAGGACCTGATCTGCCGGCTCAACTACCGGCAACTGGATTTGATCATTTCTCTTATCTTCATCCGAACAACCTAGTTCCCTCAGAAAGCATGTATATGAGTGGAAGGCAATTGCACTATCCGGAGGTACAAAACCCCAACATGCATCAAGGAACTAATTATGATATTTATAATCCGGTGGCAGGGTATGGGCCTAGTCATGATGGACAGCAGCTGCAGCCAGGAAATGAAGAACCAATGCAGCCAGAGAATGCAGTCTCTTTGCCACAAGAACATACTATGAAAGGGGATGAAATTACAGGAGACTTGCAATATTTTGGTAAAGACGCGTTCCACAATGAGCTTGACAGACCTATAGATCATTCTTTCTTTGGATCACCGATCAGTAGCATGTCGTTAGATTTTGGAGGATTCAACAGTTCGCCACTCCATTTGGATGATTTCTTGGGTGATGATGAAATGATCCAGTACTTTGGAGCATAG	1776	0.4257	MGEIEEIGIDVCSDIDVDDIRCHNIAEKDVSDEEIEAEELERRMWKDRIKLKRLKEKQKIAAQQAAEKQKPRHTTDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMSEAENNRNGNSQSTLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGIPPPWWPTGKEDWWVQLNLPHNQSPPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREEALIRQYSTDNGTSGITDTPPTVPAGNKQPATSSDSNYDVDGVDDGAGSVSSKEDRRNQVVETEPSDNSRRNSIKEKDQAEKQSRKRKPRSRSNTTDKLPPQPNKEVLQVEPVTTLPNVNQTGALMAGHIPGNEGGNDADTSMRLVDKGPDLPAQLPATGFDHFSYLHPNNLVPSESMYMSGRQLHYPEVQNPNMHQGTNYDIYNPVAGYGPSHDGQQLQPGNEEPMQPENAVSLPQEHTMKGDEITGDLQYFGKDAFHNELDRPIDHSFFGSPISSMSLDFGGFNSSPLHLDDFLGDDEMIQYFGA	591

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc241734g00006	591	MobiDBLite	consensus disorder prediction	60	83	-	-
	Stsc241734g00006	591	Pfam	Ethylene insensitive 3	38	285	IPR047091	GO:0003700
	Stsc241734g00006	591	MobiDBLite	consensus disorder prediction	379	393	-	-
	Stsc241734g00006	591	FunFam	Ethylene insensitive 3-like 1	72	150	-	-
	Stsc241734g00006	591	MobiDBLite	consensus disorder prediction	69	83	-	-
	Stsc241734g00006	591	FunFam	Ethylene insensitive 3-like 1	159	295	-	-
	Stsc241734g00006	591	Coils	Coil	23	57	-	-
	Stsc241734g00006	591	MobiDBLite	consensus disorder prediction	293	393	-	-
	Stsc241734g00006	591	SUPERFAMILY	DNA-binding domain of EIN3-like	166	289	IPR023278	GO:0003700\|GO:0005634
	Stsc241734g00006	591	Gene3D	-	73	148	IPR023278	GO:0003700\|GO:0005634
	Stsc241734g00006	591	Gene3D	-	158	296	IPR023278	GO:0003700\|GO:0005634
	Stsc241734g00006	591	MobiDBLite	consensus disorder prediction	494	516	-	-
	Stsc241734g00006	591	PANTHER	ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN	15	578	IPR006957	GO:0003700\|GO:0005634
	Stsc241734g00006	591	MobiDBLite	consensus disorder prediction	293	323	-	-
	Stsc241734g00006	591	MobiDBLite	consensus disorder prediction	332	369	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc241734g00006	Stsc-Chr241734	20154	23222	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc241734g00006	18	591	EIL Transcription Factor Family	AT1G73730	52.840	0.0	539

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	EIL	Stsc241734g00006		EIN3	8.9e-127	No_clan