Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2138g00001 ATGACAAAAATTATAACTTCCAAAACTGGTAATCATCATCATTACAAGGATAATGTGTCTGCAACAATGTGCAAATATGTTATATGGACACCTATAAATGGATTGGGAAATAGAATGATTAGCATTGCATCCACATTTCTGTATGCTGTTCTCACTGAAAGAGTTTTGTTAGTAAAATTTGAACCTGACATGCATGGCCTATTCTGTGAACCATTTCAAGAATCCACTTGGATTTTGCCTAAGAATTCACCCTTTTGGAACTGTGAGAATGTTGAGACATATCAAAGTGTGTTGGCTAAGGTGGACAAGGCTAGAAACTTGACATTGGATCAATTATCAATACCTTCTGTTCTGTTTATTAATCTACTATTTGCAAAAGGATATCCTGAAAGCTTTTTTCATTGTGATCAAAATCAAGAAGCTCTCAACAAAGTTGATGTCTTGATTGTTCTGTCAGGACATTATTTTGTGCCTTATCTGTTCATGACTTCATCTTTTAGTCTTAAACTGAATAAGATGTTTCCGGAAAAGAATGTTATTTTCCACCACGTCGGACGGTATCTCTTCCACCCTTCGAACGAGGTGTGGGGACAAATTACTAGATTCTATGACGCATACTTGGCGAAAGCAAATAAGAGAATTGGGCTTCAGGTGAGAGTGTTTAACTCGGCTACTCTGAAACAAGAAATTATGGACTTACTCTTAAGCTGTATTATAAAGAATAAGATACTTCCAGAAATCGATACGCGAAATCCGGCTTCAAATGCGGAAAATACCAACCATACTCTAAAAGTTGTTCTTGTGACATCTTTATATCCAGAATATGCTGAGAATTTGAGAACATGTATCTTAGAGGACCAACTATTACAGGAGAAGTAA 879 0.3606 MTKIITSKTGNHHHYKDNVSATMCKYVIWTPINGLGNRMISIASTFLYAVLTERVLLVKFEPDMHGLFCEPFQESTWILPKNSPFWNCENVETYQSVLAKVDKARNLTLDQLSIPSVLFINLLFAKGYPESFFHCDQNQEALNKVDVLIVLSGHYFVPYLFMTSSFSLKLNKMFPEKNVIFHHVGRYLFHPSNEVWGQITRFYDAYLAKANKRIGLQVRVFNSATLKQEIMDLLLSCIIKNKILPEIDTRNPASNAENTNHTLKVVLVTSLYPEYAENLRTCILEDQLLQEK 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2138g00001 292 Gene3D - 21 143 - -
Stsc2138g00001 292 Pfam Xyloglucan fucosyltransferase 18 285 IPR004938 GO:0008107|GO:0016020|GO:0042546
Stsc2138g00001 292 FunFam Galactoside 2-alpha-L-fucosyltransferase 22 73 - -
Stsc2138g00001 292 PANTHER FUCOSYLTRANSFERASE 2-RELATED 14 286 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2138g00001 Stsc-Chr2138 5541 6526 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2138g00001 24 285 Xyloglucan Fucosyltransferase1 AT2G03220 45.247 1.48e-71 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2138g00001 K13681 - gmx:100787812 315.849