Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211846g00002 ATGAAAAGGCTCATCACAATAAGGAATGTGGAAGGAGGAGGTGGTGGAAGTGATGATGCACTGAAGAATCTGAATCCCTCTTCAGATTTGGAGACTCACAGTTACTCTGAGAAGAAGAATACTACTCTCCCTCTGATGCGTTTGATGGGGTTCTTTCTTGTTTCTTTCATGCTCTTCTCTGTACTCTTCTCAATCTCTGTTGTTCTTAGAGACCCTCCCTCTGATGCTGTTCTAGAAGCTTCACATACCACTACTACTACTGCTACTACTGTCTTTCAGCAACAAGGTGTGAACAACATTCCCTCTGATTCTGCTGTTGAGGAGCCAATAGATAAACTGATTGGTGGCCTTCTAACCGATGGATTCGACGAAAGATCTTGTCTCAGCAGGTATCAGTCAGCCAGTTATCACAAAGGACTATCAGCTAAACCTTCTTCTTACCTCATTTCTAGGCTAAGAAAATATGAAGCTCTACACAAAAAATGTGGACCTTATACTGAATCTTATAACAAAACTGTGAATGAACTGAGGTCTGGTCAGTTTTCCGAGTCGTCGCCTTGTAAATATGTTGTGTGGATTTCATTTAGTGGATTAGGGAATAGGATATTGACCCTAGCTTCTGCTTTTCTCTATGCTCTCCTCACCGACCGTGTTCTGCTGGTCGATCCAGGAAAGGATATGGTTGATCTCTTCTGTGAACCATTCCCAGAAGTGTCCTGGTTTCTTCCCTCTGATTTTCCTCTCAAGGGTCAATTTCATGATTTCAATCAGAAATCAGAAAAATGTTATGGAAAAATTCTGAAAAACAACTCGGTTGCGAGTTCAACTTTGCCGCCGTCCTTTCTCTATCTTCATCTAGTCCATGACTATGATGATGAAGACAAGCTTTTCTTCTGTGATGAACAACAACATTTCCTCAAGAAAGTACCATGGTTACTTGTCAAAACAGATAATTACTTCGCTCCATCTCTATTTTTGATGCCGTCTTTCGAAAAAGAACTGAATGACCTATTCCCAAACAAAGAAACAATCTTCCATTTCTTGGGCAGATACCTACTCCACCCAACAAACAATGTTTGGGGACTAGTTGTAAGATACTACCAATCTTATCTAGCCAATGCCAATGAAAGAGTTGGTATACAAATTCGAGTGTTCGACACAGAACCTGGTCCATTCCAACATGTATTGGATCAAATCTTAGCTTGTACATTGAAGGAGAATCTCTTGCCCGATGTTAACCGGGACGAAGACACAGTTAGTCCATCAGAATCCCCGAAATCGAAAGCGGTGCTAATGACATCCTTAAATGCTGGCTATTTTGAAAAGGTAAGGGACATGTATTGGGAATATCCTACTGTGACAGGTGAAGTTGTTGGAATTTACCAACCAAGCCATGAAGAACATCAACAATCCGAGAAACAGATGCATAACCAAAAAGCTTGGGCAGAAATGTACCTGTTAAGTTTGAGTGATGTGTTGGTTACTAGTTCTTGGTCTACTTTTGGATATGTTGCTCAAGGTCTTGGAGGCTTGAAGCCTTGGATACTGTACAAGCCAGAGAACCGAACTGCTCCGAATCCTGCTTGCCGGCGTGCAATGTCGATGGAGCCGTGTTTCCATGCTCCTCCATTCTGGGACTGCAGGGCTAAGAGAGGAATTGACACGGGTGAACTTGTTCCTCATGTTAGACACTGTGAAGATATGAGTTGGGGTCTTAAGCTTGTAGACAGGGACAATTTTGATTAA 1746 0.4204 MKRLITIRNVEGGGGGSDDALKNLNPSSDLETHSYSEKKNTTLPLMRLMGFFLVSFMLFSVLFSISVVLRDPPSDAVLEASHTTTTTATTVFQQQGVNNIPSDSAVEEPIDKLIGGLLTDGFDERSCLSRYQSASYHKGLSAKPSSYLISRLRKYEALHKKCGPYTESYNKTVNELRSGQFSESSPCKYVVWISFSGLGNRILTLASAFLYALLTDRVLLVDPGKDMVDLFCEPFPEVSWFLPSDFPLKGQFHDFNQKSEKCYGKILKNNSVASSTLPPSFLYLHLVHDYDDEDKLFFCDEQQHFLKKVPWLLVKTDNYFAPSLFLMPSFEKELNDLFPNKETIFHFLGRYLLHPTNNVWGLVVRYYQSYLANANERVGIQIRVFDTEPGPFQHVLDQILACTLKENLLPDVNRDEDTVSPSESPKSKAVLMTSLNAGYFEKVRDMYWEYPTVTGEVVGIYQPSHEEHQQSEKQMHNQKAWAEMYLLSLSDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPNPACRRAMSMEPCFHAPPFWDCRAKRGIDTGELVPHVRHCEDMSWGLKLVDRDNFD 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211846g00002 581 Gene3D - 184 238 - -
Stsc211846g00002 581 PANTHER FUCOSYLTRANSFERASE 2-RELATED 56 576 IPR004938 GO:0008107|GO:0016020|GO:0042546
Stsc211846g00002 581 FunFam Galactoside 2-alpha-L-fucosyltransferase 185 236 - -
Stsc211846g00002 581 Pfam Xyloglucan fucosyltransferase 97 548 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211846g00002 Stsc-Chr211846 18744 21204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211846g00002 46 575 Xyloglucan Fucosyltransferase1 AT2G03220 63.227 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211846g00002 K13681 - gmx:100803305 840.876