Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181404g00006 ATGATGATGTTTGAGGACATGGGTTTTTGTGGCGATTTGGATGTTTTGTGCGGTCCCCTCGGGGATTCGGATATGACTGCCAGGCAGACTGAGCCTGATGCAGTGGTTGAGGATGATTATAGTGATGAGGAGATTGATGTGGATGAACTTGAGAGGAGGATGTGGCGGGACAAAATGCGTCTCAAGCGATTGAAAGAACAAAGCAAGGCTAAAGAAGGCATCGACGCGGCGAAGCAAAGGCAGTCCCAAGAACAAGCTAGGAGGAAAAAGATGTCAAGGGCTCAAGATGGGATACTCAAGTATATGCTTAAGATGATGGAGGTTTGCAAGGCTCAGGGATTTGTCTATGGGATTATTCCTGAGAAGGGAAAGCCCGTTACCGGGGCGTCTGACAATCTTAGGGAGTGGTGGAAGGATAAGGTCCGGTTTGATCGAAACGGTCCAGCTGCTATAGCCAAGTATCAAGCGGATAATGCTATCCCGGGGAAGAATGATGGATGCAATGCTATCGGTCCGACTCCACACACCTTGCAAGAGTTACAAGACACAACCCTGGGGTCTCTCTTGTCTGCACTGATGCAGCACTGTGATCCTCCTCAGAGGAGGTTCCCTCTAGAGAAGGGTGTTCCTCCGCCGTGGTGGCCGACCGGGAATGAAGAGTGGTGGCCCCAAATCGGTTTACCTAAAGATCAAGGCCCTCCTCCTTACAAGAAGCCTCATGATCTGAAGAAGGCATGGAAGGTGGGGGTTCTAACTGCTGTTATCAAGCACATGTCTCCCGATATCGCCAAGATTCGCAAGCTCGTGAGGCAGTCCAAATGCCTTCAAGATAAGATGACGGCGAAGGAGAGTGCGACCTGGCTCGCCATCATCAATCAAGAGGAGGCCTTGGCTAGGGAGCTTTATCCTGATTATTGCCCCCCTTTGTCTTCTGCTGGGGGAAGTGGATCATTGGTCATCAATGATTGCACCGAGTATGATGTCGATGGAGCTGAGAATGAGCCTAACTTCGATGTGGAGGACCGGAAACCCGAGAATCTTCATCCATCTAACCTCGGCATGGACCGAATGAGGGGAAGGCTGCAGCAGGTTCAGAAGCCTTCTCTTCCAATCAAAGGAGAGATTGTGACAAACTTGGACTTCATCCGAAAGAGGAAGAGTGACTTCAACATGATGGTGGATCAGAAAATCTATACATGTGAGCACCCTCAGTGCCCTTACAGCGAAGGCCGGCTCGGCTTCCAAGACAGGTCTTCAAGGGACAACCACCAACTGAACTGTCCATATAGAAACAACTCTGCTGCTGATTTCGCCGGTCCGAATTTCCATGTCAACGAGGTCAAGCCGGTTATATTCCCCCAAACCTATGTCCAACCCAACACCACAGCACAGCCTGCTAGCATGGTTCCGCAGACATTCGACTTAACCGGTCTCGGCGTCCCGGAGGATGGCCAGAAGATGATCAGTGACCTCATGTCAATCTATGATGCCAATGTTGTAGGAAGCAAGAACACAAGTTCCAACAGCTATGTAGCTGCTGCTGCTGCTGCTGCAGAGAATCAAAATCAAAACATTCCTCAACAATGCATCAATCAACAACAGGAGAGTTTCTTTCCCAATCAAGGAATGGTGATGGAAGGAAACTTCTATGCAAGGGATGAAAGTCAATATGACAGGTTCAAAGCCATGAACTCGTCACCCTTCGACACCGCCACCGCCACCGCCGCCGCCACACCAACCGCCACAAATAACCACAATAACAACTTCAATTTTATGTTTGGAGCCCCTTGTGATCTAGGATCATTTGATTTCAAGGAGGATATACAAGGAGGAATGGGGATGGAATCACTTCACAAACAACCAGATGTTTCAATATGGTACCAGTAA 1887 0.4923 MMMFEDMGFCGDLDVLCGPLGDSDMTARQTEPDAVVEDDYSDEEIDVDELERRMWRDKMRLKRLKEQSKAKEGIDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGKNDGCNAIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYCPPLSSAGGSGSLVINDCTEYDVDGAENEPNFDVEDRKPENLHPSNLGMDRMRGRLQQVQKPSLPIKGEIVTNLDFIRKRKSDFNMMVDQKIYTCEHPQCPYSEGRLGFQDRSSRDNHQLNCPYRNNSAADFAGPNFHVNEVKPVIFPQTYVQPNTTAQPASMVPQTFDLTGLGVPEDGQKMISDLMSIYDANVVGSKNTSSNSYVAAAAAAAENQNQNIPQQCINQQQESFFPNQGMVMEGNFYARDESQYDRFKAMNSSPFDTATATAAATPTATNNHNNNFNFMFGAPCDLGSFDFKEDIQGGMGMESLHKQPDVSIWYQ 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181404g00006 628 MobiDBLite consensus disorder prediction 335 349 - -
Stsc181404g00006 628 FunFam Ethylene insensitive 3-like 1 168 305 - -
Stsc181404g00006 628 SUPERFAMILY DNA-binding domain of EIN3-like 174 298 IPR023278 GO:0003700|GO:0005634
Stsc181404g00006 628 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 29 604 IPR006957 GO:0003700|GO:0005634
Stsc181404g00006 628 MobiDBLite consensus disorder prediction 333 353 - -
Stsc181404g00006 628 Gene3D - 80 157 IPR023278 GO:0003700|GO:0005634
Stsc181404g00006 628 Coils Coil 47 67 - -
Stsc181404g00006 628 Gene3D - 172 305 IPR023278 GO:0003700|GO:0005634
Stsc181404g00006 628 FunFam Ethylene insensitive 3-like 1 80 158 - -
Stsc181404g00006 628 Pfam Ethylene insensitive 3 48 295 IPR047091 GO:0003700
Stsc181404g00006 628 MobiDBLite consensus disorder prediction 66 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181404g00006 Stsc-Chr181404 47501 50803 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181404g00006 2 627 EIL Transcription Factor Family AT3G20770 61.002 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Stsc181404g00006 EIN3 2.3e-131 No_clan