Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181349g00002 ATGAAAAGGCTCATCACAATAAGGAATGTGGAAGGAGGAGGTGGTGGTGGCAGTGATGATGCACTGAAGAATCTGAATCTCTCTTCAGATTTGGAGACTCACAGTTACTCTGAGAAGAAGAATACTAATCTCCCTCTGATGCGTTTGATGGGGTTCTTTCTTGTTTCTTTCATGCTCTTCTCTGTCCTCTTCTCACTCTCTCTTGTTCTTAGAGACCCTCCCTCTGATGCTGTTCTAGAAGCTTCACAGACAACTACTGCTACTACTGTCTTTCAGCAACAAGGTGTGAACAACATTCCCTCTGATTCTGTTGAGGAGCCAATAGATAAACTGATTGGTGGCCTTCTAACCGATGGATTCGACGAAAGATCTTGTCTCAGTAGGTATCAGTCAGCCAAATATCACAAAGGGCTATCAGCTAAACCTTCTTCTTACCTCATTTCTAGGCTAAGAAAATATGAAACTCTACACAAACAATGTGGACCTTATACCGAATCTTATAACAAAACTGTGAATGAACTGAGGTCTGGTCAGTTTTCCGAGTCGTCGCCGTGCAAATATGTTGTCTGGATTTCATTTAGTGGATTAGGGAATAGGATATTGACCCTAGCTTCTGCATTTCTCTATGCTCTCCTCACCGACCGTGTTCTGCTGGTCGATCCAGGAAAGGATATGGTTGATCTCTTCTGTGAACCATTCCCAGAAGTGTCCTGGTTTCTCCCCTCTGATTTTCCTCTCAAGGGTCAGTTTCATGATTTCAATCAGAAATCGGAAAAATGCTATGGAAAAATTCTGAAAAACAACTCAGTTGCGAGTTCAGCTTCGCCGCCGTCTTTTCTCTACCTACACCTAGTCCATGACTATGATGATGAAGACAAGCTTTTCTTCTGTGATGAACAACAAAATTTCCTCAAGAAAGTACCATGGTTACTTGTCAAAACAGATAATTACTTCGCTCCATCTCTATTTCTGATGCCGTCTTTCGAAAAAGAACTGAATGACCTATTCCCAAACAAAGAAACAATCTTCCATTTCTTGGGTAGATACCTACTCCACCCAACAAACAATGTGTGGGGACTAGTTGTAAGATACTACCAATCTTATCTAGCCAATGCCAATGAAAGAGTTGGTATACAAATTCGAGTGTTCGACACAGAACCCGGTCCATTCCAACATGTATTGGATCAAATCTTAGCTTGTACATTGAAGGAGAATCTCTTGCCCGATGTTAACCGGGACGAAGACATAGTTAGTCCATCAGAAACCCCGAAATCAAAAGCGGTGCTAATGACATCCTTAAATGCTGGCTATTTTGAAAAGGTAAGGGACATGTATTGGGAATATCCTACTGTGACAGGAGAAGTTGTTGGAATTTACCAACCAAGCCATGAAGAACATCAACAATCCGAAAAACAGATGCATAACCAGAAAGCTTGGGCAGAAATGTACCTGTTAAGTTTGAGTGATGTGTTGGTTACTAGTTCTTGGTCTACTTTTGGATATGTTGCTCAAGGTCTTGGAGGGTTGAAGCCTTGGATACTCTACAAGCCGGAGAACCGAACTGCTCCGAATCCTGCTTGCCGGCGTGCCATGTCGATGGAGCCGTGTTTCCATGCTCCTCCATTCTGGGACTGCAGGGCTAAGAGAGGAATTGACACAGGTGAACTTGTTCCTCATGTGAGGCACTGTGAAGATATGAGTTGGGGTCTCAAGCTTGTAGACAGAGACAATTTTGATTAA 1740 0.427 MKRLITIRNVEGGGGGGSDDALKNLNLSSDLETHSYSEKKNTNLPLMRLMGFFLVSFMLFSVLFSLSLVLRDPPSDAVLEASQTTTATTVFQQQGVNNIPSDSVEEPIDKLIGGLLTDGFDERSCLSRYQSAKYHKGLSAKPSSYLISRLRKYETLHKQCGPYTESYNKTVNELRSGQFSESSPCKYVVWISFSGLGNRILTLASAFLYALLTDRVLLVDPGKDMVDLFCEPFPEVSWFLPSDFPLKGQFHDFNQKSEKCYGKILKNNSVASSASPPSFLYLHLVHDYDDEDKLFFCDEQQNFLKKVPWLLVKTDNYFAPSLFLMPSFEKELNDLFPNKETIFHFLGRYLLHPTNNVWGLVVRYYQSYLANANERVGIQIRVFDTEPGPFQHVLDQILACTLKENLLPDVNRDEDIVSPSETPKSKAVLMTSLNAGYFEKVRDMYWEYPTVTGEVVGIYQPSHEEHQQSEKQMHNQKAWAEMYLLSLSDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPNPACRRAMSMEPCFHAPPFWDCRAKRGIDTGELVPHVRHCEDMSWGLKLVDRDNFD 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181349g00002 579 Gene3D - 182 235 - -
Stsc181349g00002 579 PANTHER FUCOSYLTRANSFERASE 2-RELATED 57 574 IPR004938 GO:0008107|GO:0016020|GO:0042546
Stsc181349g00002 579 FunFam Galactoside 2-alpha-L-fucosyltransferase 183 234 - -
Stsc181349g00002 579 Pfam Xyloglucan fucosyltransferase 99 546 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181349g00002 Stsc-Chr181349 17101 19489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181349g00002 2 573 Xyloglucan Fucosyltransferase1 AT2G03220 60.174 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181349g00002 K13681 - gmx:100803305 838.565