Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc123680g00001 ATGGTCAAAATCTCAAACAATTTTGCTTCTTTTGAGGGTTTTCAAAAAGTATTAGGAGGGAAATATCAGAATGTTACAGATGAATTTCTAAGTAAAGTAGTCCCACTTAATAATAATGGTACAAATAATAACAATACTAGCTTGGGATTATTGGAAGGAAGAGGAATAGTCCAGAATATGACACATCAGAAATTAGGAGAAGGAGGAGAAGAAAAGAATAATAATACTATTGAGGTGGTCCAAGAGAAAACTCAAAATAATCATACTGCTTCACAAGAAATACCAACAGATGAAGTGCCACCAAATGACTCCAAAAAAATTTCAACAAATGATTCAATCAAAGAAGTTAAAAACTATGATGACAAATTTATGGATGGACTCTTAGCTTCTGGATTTGATGAATCAACATGCCTAAGCAGATACCAATCCCATTTATACCGCAAAGTTTCTCCTTACAAGCCATCTCCATATTTGATTTCTAAACTAAGAAACTATGAACAAATTCACAAAAAGTGTGGACCCAACACTATTGCTTACAACACAACCATGGCAAAAATCATAATCCCAAGTTCTTCTGAAACTGATGATCATCATCATTACAATGATAATGTTTCTGATGCTACATTGTGCAAATATGTTGTATGGTCACCTGCAAATGGATTGGGAAATAGAATGATTAGCATTGCAGCCACATTTCTGTATGCTGTTCTCACTGAAAGAGTTTTGTTAGTAAGATTTGAACCTGACATGCATGGCCTTTTCTGTGAACCATTTCAAGATTCCACTTGGATTTTGCCTATGGATTCACCTTTTTGGAACAATGAGAATATTGAGACATATCAAAGTGTGTTAGGTAAGGAGGACAATGCTAGAAACTTGACATTGGATCAATTATCATTACCTTCTGTTCTGTTTATTGATCTACAATTTAGACCAGAGGATCCTGAAAGGTTTTTTCATTGTGATCATAATCAAGAAGCTCTCAACAAAGTTGATGTCTTGATTATTCAGTCAGATCAGTACTTTGTGCCTTCTCTGTTTATGATTCCATCTTTTAGTGTTGATCTGAACAAGATGTTCCCGGAAAAGGATGCTGTTTTCCACCATGTCGGACGGTACCTTTTCCACCCTTCGAACGATGCGTGGGGACAAATTACCAGATTCTATGATGCATACTTGGCGAAAGCAGACGAGAGGATTGGCCTTCAGGTTAGAGTGTTTAACCCCGCTTCCATTCCGCAACAAGCAGTTGTGAACTTACTTTTAAGTTGTGCCATAGAGAACAAGATACTTCCAGGAATTGATACGCAAAATCCGGCTTCAAATGCGAAAAATACCAACCATACTCTAAAAGCTGTTCTTGTGGCATCTTTATATCCAGAATATGCTGAAAATTTGAGAACTATGTACCTTAAAGGACCAACTGTTACAGGAGAAGTAATAGGAATTTATCAACCAAGTCATGAAGAAGAGCAAAAGTTTAATGACAATGTGCACAACATAAAGGCATTAGTTGATATGTATCTACTGAGTTTATGTGATGTGTTGGTGACTACTTCTGTGTCTACTTTTGGTTATGTGGCTCATGGTTTTGGGGGTTTGAAGCCTTGGTTACTTTATAGGCTAACAAGTGACGAGACACATTCTCCAGCTTGTGTAAGAGACTATTCACCTGAGCCTTGTTACCATTTTGGTCCTCAGCATCAATGTAATGGGAAGCCTGAACAACATTTTGGTACTTCTTTCCCACATATCTTTGAATGCAAGGATTTTGATCGTGGAGTGAAGCTTGTTGATGGTGTATAG 1806 0.3693 MVKISNNFASFEGFQKVLGGKYQNVTDEFLSKVVPLNNNGTNNNNTSLGLLEGRGIVQNMTHQKLGEGGEEKNNNTIEVVQEKTQNNHTASQEIPTDEVPPNDSKKISTNDSIKEVKNYDDKFMDGLLASGFDESTCLSRYQSHLYRKVSPYKPSPYLISKLRNYEQIHKKCGPNTIAYNTTMAKIIIPSSSETDDHHHYNDNVSDATLCKYVVWSPANGLGNRMISIAATFLYAVLTERVLLVRFEPDMHGLFCEPFQDSTWILPMDSPFWNNENIETYQSVLGKEDNARNLTLDQLSLPSVLFIDLQFRPEDPERFFHCDHNQEALNKVDVLIIQSDQYFVPSLFMIPSFSVDLNKMFPEKDAVFHHVGRYLFHPSNDAWGQITRFYDAYLAKADERIGLQVRVFNPASIPQQAVVNLLLSCAIENKILPGIDTQNPASNAKNTNHTLKAVLVASLYPEYAENLRTMYLKGPTVTGEVIGIYQPSHEEEQKFNDNVHNIKALVDMYLLSLCDVLVTTSVSTFGYVAHGFGGLKPWLLYRLTSDETHSPACVRDYSPEPCYHFGPQHQCNGKPEQHFGTSFPHIFECKDFDRGVKLVDGV 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc123680g00001 601 Gene3D - 207 263 - -
Stsc123680g00001 601 FunFam Galactoside 2-alpha-L-fucosyltransferase 208 259 - -
Stsc123680g00001 601 MobiDBLite consensus disorder prediction 84 108 - -
Stsc123680g00001 601 PANTHER FUCOSYLTRANSFERASE 2-RELATED 99 599 IPR004938 GO:0008107|GO:0016020|GO:0042546
Stsc123680g00001 601 MobiDBLite consensus disorder prediction 84 107 - -
Stsc123680g00001 601 Gene3D - 384 537 - -
Stsc123680g00001 601 Pfam Xyloglucan fucosyltransferase 116 570 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc123680g00001 Stsc-Chr123680 1616 4184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc123680g00001 121 598 Xyloglucan Fucosyltransferase1 AT2G03220 49.372 1.61e-156 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc123680g00001 K13681 - gmx:100818288 647.506