Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3707 ATGGAGCAGCTGACACTAGGGTTTTCTTTTCTGTTAACGCTTCACCTATCCGTATCAGGAGTAATTTCAACAACATTCACACTAGTCAACAAATGCGAGTACACAGTATGGCCAGGCATTCTTTCCAACGCTGGAGTTGCTCCTCTTTCATCCACCGGCTTTCTTCTTGAAAGAGGTGAGTCCAAGAGCATCTCTGCACCCAGTTCTTGGGGTGGGCGCTTCTGGGGTCGAACTCAATGCGCACAAGACTCCACCGGAAAGTTCTCCTGCGTCACCGGCGACTGTGGGTCGGGGAAGCTGGAATGTGCGGGGAAAGGTGCGACACCGCCGGCGACGTTGGCGGAATTCACCTTAGACGGAGCCGGGGGGTTGGATTTCTTCGATGTGAGCTTGGTAGACGGATACAACGTGGCTATGATGGTGGTTCCTGAAGGTGGTTCGGGAGAGAAGTGCAGGAGCACGGGATGTGTGGTGGATCTGAACGGCGCGTGTCCGTCAGAGCTGAAAGTAATGAGCGTAGATGGAAAAGAAGGGGTAGCGTGCAAGAGCGCTTGCGAGGCCTTTGGGTCGGCTCAGTACTGTTGCAGCGGCGCGTATGGATCTCCCAACACCTGCAAGCCATCGTCTTATTCGCAGATATTTAAGAAAGCTTGCCCACGCGCCTACAGCTACGCGTACGACGACAAAAGCAGCACATTTACATGTGCGTCTGCAGACTACACCATCACCTTTTGTCCGTCCCCCAACACCAGTGAGAAAGCATCGCAGGAGCAAAACAAGAAACCGGAGAGTGAGAGTGAGGCTCCTCCTGCTACTGCTACTGCTACTAGCGGCGGCGGCATTGGCAGCATGGTGTACGAAGGTGCTTTCGATCAAAGTGTTGCGAGCTCATCCTCATCCTCCACACCTGATGTCGTAGGAGAACTGAGCTTCGTTGAGCCCATTTCGGAGCCGACGACGGTGACGACGAGCTTCTGGCAGGTGGAGCCAGCGAGAGAGTTCCGATTAGTGGGAACAGCGTGGTTGTGCTCCGCCGTGTATGTGACTATGAACATCATAGAATCCGATATGTTCCTCTCCACTTGTTTTTGTGCGTATCGTTGTCGAATGCGTATAGACGTAACGCTGCATCGCAGTTTTGCTGTAATGTCGGCGGCCAAAATTGAGGATCCAAATAGCTCTCAGAAGCTGGTTACTAGTGATGAAAGTATTGTTGTTGCAGTTAATGGTTGTGGAGTGGAGCACAGCACAGCAACAAGATTGATTTTGCAGACCATGAATTCTTGA 1287 0.5221 MEQLTLGFSFLLTLHLSVSGVISTTFTLVNKCEYTVWPGILSNAGVAPLSSTGFLLERGESKSISAPSSWGGRFWGRTQCAQDSTGKFSCVTGDCGSGKLECAGKGATPPATLAEFTLDGAGGLDFFDVSLVDGYNVAMMVVPEGGSGEKCRSTGCVVDLNGACPSELKVMSVDGKEGVACKSACEAFGSAQYCCSGAYGSPNTCKPSSYSQIFKKACPRAYSYAYDDKSSTFTCASADYTITFCPSPNTSEKASQEQNKKPESESEAPPATATATSGGGIGSMVYEGAFDQSVASSSSSSTPDVVGELSFVEPISEPTTVTTSFWQVEPAREFRLVGTAWLCSAVYVTMNIIESDMFLSTCFCAYRCRMRIDVTLHRSFAVMSAAKIEDPNSSQKLVTSDESIVVAVNGCGVEHSTATRLILQTMNS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3707 428 SUPERFAMILY Osmotin, thaumatin-like protein 24 247 IPR037176 -
Sto9g3707 428 PANTHER BNAA02G17480D PROTEIN 4 273 - -
Sto9g3707 428 SMART tha2 26 246 IPR001938 -
Sto9g3707 428 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Sto9g3707 428 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Sto9g3707 428 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Sto9g3707 428 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Sto9g3707 428 Gene3D Thaumatin 24 246 IPR037176 -
Sto9g3707 428 ProSiteProfiles Thaumatin family profile. 23 246 IPR001938 -
Sto9g3707 428 CDD TLP-PA 25 245 - -
Sto9g3707 428 Pfam Thaumatin family 30 246 IPR001938 -
Sto9g3707 428 ProSitePatterns Thaumatin family signature. 86 102 IPR017949 -
Sto9g3707 428 MobiDBLite consensus disorder prediction 249 279 - -
Sto9g3707 428 PANTHER OS03G0233200 PROTEIN 4 273 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3707 Sto-Chr9 35382876 35394827 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3707 9 35382876 35394827 Sto11g1468 11 13923567 13924695 ECH
Sto9g3707 9 35382876 35394827 Sto9g3707 9 35382876 35394827 ECH