Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3563 ATGTCAAGCAAGGGTGAACACCATACGGTCCCCCTTTCGGTGCTTCTGAAGCGTGAATTGGCAAGCGAGAAAATTGAAAAACCAGAAATTCTGCATGGTCAAGCTAGCCAGAGCAAAAAGGGAGAGGATCTCACGCTACTGAAAACGGAATGCCAAAGGGTAGTGGGAGATGGGGTGTCGATATATTCTGTTTTCGGACTATTTGATGGACACAATGGATCTGCTGCTGCTATTTATGCCAAGGAGAATCTCCTAAATAATGTTTTAAGTGCGATTCCTTCAGATCTTAATAGAGATGAGTGGATAGCAGCACTGCCCAGGGCTTTGGTTGCTGGCTTTGTAAAAACTGATAAAGATTTTCAACAGAAAGCACAAAAATCGGGAACAACTGTAACCTTTGTGATTATAGAAGGATTGGTTGTCACTGTTGCCTCTGTTGGAGATTCCCGTTGCATACTTGAACCTTCTGAAGGTGGGATTTATTACCTGTCAGCGGATCATAGGCTAGAAACCAATGAAGAGGAGGTGGTACGTATCACAACTAGTGGGGGTGAGGTTGGTCGGCTAAACACTGGTGGGGGTGCTGAGATTGGTCCTTTGAGATGTTGGCCTGGTGGTTTGTGTCTTTCAAGATCCATTGGTGATATGGATGTCGGTGAATTCATTGTTCCTGTGCCTTACGTAAAGCAAGTGAAGCTGTCCACTGCTGGAGGCAGGCTTATTATCTGCAGTGATGGTGTTTGGGATTCTCTATCTGCAGAAGCGGCCCTTGATTGTAGTCGTGGGATGTCACCAGAGGTTGCAGCACCACATATTGTTAAAGAAGCTGTACAAGCAAAGGGATTGAGAGATGATACAACCTGCATCGTTATTGATATCCTAGCCCCGGAGAAACCATGTGCTCCTTTGACACAAAGTAAGAAACCCGTAAAAGGAATGTTCAAGTCCATGTTTCGTAGAAAGTCTGCAGAATCATCATCTTATAATGAGAAAGATTACATGGAGCCTGATGTGGTAACGGAACTGTGCGAGGAAGGATCTGCTATGCTTTCGGAGAGATTTGATACAAAGTATCCACTCTGCAACATGTTCAAGTTGTTCACGTGTGCAGTGTGTCAAGTCGAGATGAAACCTGGGGAGGGTGTATCCATACATGAGGGTGCACCCAACCCAGGAAAATTGCGTCCCTGGGATGGTCCATTCCTTTGCTTAAGTTGccaagagaagaaagaagccATGGAAGGGAAAAGAACATCAGACTTAGCAGCGGGAGTGACTAACCAATTCTCATGCATATTTGCATTTTGA 1308 0.4434 MSSKGEHHTVPLSVLLKRELASEKIEKPEILHGQASQSKKGEDLTLLKTECQRVVGDGVSIYSVFGLFDGHNGSAAAIYAKENLLNNVLSAIPSDLNRDEWIAALPRALVAGFVKTDKDFQQKAQKSGTTVTFVIIEGLVVTVASVGDSRCILEPSEGGIYYLSADHRLETNEEEVVRITTSGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSTAGGRLIICSDGVWDSLSAEAALDCSRGMSPEVAAPHIVKEAVQAKGLRDDTTCIVIDILAPEKPCAPLTQSKKPVKGMFKSMFRRKSAESSSYNEKDYMEPDVVTELCEEGSAMLSERFDTKYPLCNMFKLFTCAVCQVEMKPGEGVSIHEGAPNPGKLRPWDGPFLCLSCQEKKEAMEGKRTSDLAAGVTNQFSCIFAF 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3563 435 SMART PP2C_4 21 291 IPR001932 -
Sto9g3563 435 PANTHER ALPHABET, ISOFORM E-RELATED 3 421 - -
Sto9g3563 435 SUPERFAMILY PP2C-like 38 293 IPR036457 -
Sto9g3563 435 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 3 421 - -
Sto9g3563 435 Gene3D - 34 298 IPR036457 -
Sto9g3563 435 Pfam Protein phosphatase 2C 62 277 IPR001932 -
Sto9g3563 435 SMART PP2C_SIG_2 46 293 IPR001932 -
Sto9g3563 435 CDD PP2Cc 62 293 IPR001932 -
Sto9g3563 435 ProSiteProfiles PPM-type phosphatase domain profile. 31 293 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3563 Sto-Chr9 34549812 34553528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3563 1 419 PP2C-type Phosphatase Gene Family AT1G47380 80.191 0.0 703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1202 5 8100874 8105083 Sto9g3563 9 34549812 34553528 CCT
Sto9g3563 9 34549812 34553528 Sto9g3563 9 34549812 34553528 ECH