Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3560 ATGCAAGCGATGGAGAGGCTAGGCAGCTACCTTAGTCGGGGGGTGTACACTGTTTCTGGCCCCTTTCATCCTTTTGGTGGCGCTGTGGATATTGTTGTGGTTGAGCAGCCAGATGGGAGCTTCAAGTCCTCGCCTTGGTACGTCCGATTTGGGAAATTTCAAGGGATTTTGAAGGCAAAGGAAAGAGTGGTCAACATTGACGTTAATGGAGCGGAAGCTGATTTTCATATGTATTTGGATCATAAAGGGGAAGCATTCTTTCTCAGGGACGTGGATGCGGAAGATGGAGAATCTATAATGTGCCCATCATGTTCTAGCCATGAGACAGATAGCCGAGCCCAGGATAATAAGCGCCCCTTGAAATCCAAAAGTTGTAATTTTGATTTAGACCAGTCAAATTCAGTAACTCAGATTGATATAAGCAATGGTAAGCTTTTGGCCAGGACTAATTCTCGCCGATCACGGATACTTGGCTTTGTATTAGGTCGGAGGTCGAAGAAGGGCATTAATAATATTCATGGGGAAGTTGATGACCCTGGTATAAACAGGGTAGATTCATTGGAGCGTGCTGAGATTGCTGCGAATCTGTTGGATATAAGGTGGTCTACCAATCTTGCTGGTGATAAACCACCTCCTAAGAACAGTATAAAAACTCAGGAGAGCTCCTCAAGCCCAGATAACGTGGCAAATGGTTTTGATCAACGTAAGTTAGACAAGAAAGCTTGTTCCTGCTGTAAGCAAGAAGGCATCAGTTCAAAATCTGAAAACTTCATGGAAGGGAAAACTGAGGTGATAACAGAAATATCAGCAATAACTGATGCTGCTGAGGACAATGAAGGTAACACAAAGGTGAAGGAAGTTGTATATGGTAGCACTGGGTCTGATTTACAAGTTGCATGTGTAAAACTTGAGACACACATTGAAGAGGAATTGAGTGGAGAAGAAGTTTCTAGTGTTAGCACTGTTGATATGCCAGTTTATGGAAGTCCTGAAAAGGAATTTTCAACAAATGAAGTTCAGTCGCTTGTTTATTGCAAAATGTCAGAGAGTTCAACCGTAGGCGTGGATTGTTCTAGTGAACAAACTCATGCAGTGCTGTACCTTGCTGGCGGAGAATGTCAAGAAGTCCATGTACAAGCTGGGATCTTACGTGCAACAACCGTACTGCTACCTGAGGTTACAAACACTGAGGAAGTCTCTAAAAACATTAGTCTTGGGATGCCAGTTATGGAGGTTTCAGAGTTTCATTCTGGTGTTAATAATTACAGTATGGCGGATGCTAAAGACACTTTATGTGAGAAGGTTCAGTCAAACTGTGGCAGCTCAACTTCCAGTTACAGCAGCCTGGATAACCAACTCTTAGACGAGAACAATAAAAAGGGCAATGGTGTCTCAAGCACGTTACTAGCTCCTGTGGAGTCTGTTGGTGATTGTGTCCTCAGCAAAATAACAAGTAGACCACCGTCGGCCAATTCAGAGGAAGATTGTTTCCTTTTCAGGGACCTTGATGAATTCGGAATCACCGATCAGTTTGAGGGATCAATCTCCCCTGATTATATTGACAAAGAAGATGATCTTTCTTATGTGGATGACACTAAAAAAGTGAACCATTTAGCTGATGCAATTTACAATTCACATTCATCTCCTGAAAGCTCTTCCTCTGATAATAAAACAGATGACCTTAAGTTAAGCAGTACATGCTATCCCATAAATGTCACTAGAAATAAGGTTGTCAGGGAGGAAGTTGAGCTGCATACAGGATCCTTGCCCAATATATCTTCTCATAAAAACAGTCTGGGTAAACATGATGTTTGTTATCCTTTAAGTCAATCATTGGACTCAAAGTCCAAATCATTGAAGTATACATTTCCTGGCAAAGATTACTCAAAATGTCTAAAATCAGATGGACACACAGAAAATCAGTTAATAAACGAGGAGCCAGGTGACAAGGATAACCATAGTTCACGGGATTTCAAGAGTGCTGTTCCAAATCCTCCCTTTGGAGACCCATCAAGAATCAACCCTTCTCCTGGTGGAAACTGGGGACTTTGGCCTTTCTCCTTCAGGAGATCAAGATCTGGAACAGCAATGCTGCCTGCTCCAAGTGATGCCAACATTACTACTTCTGGTAATGCTACAGAGAGAACTATAAGCATTGATGTAGACAAAAATGAGCTCAAGCCTAATCCGACAAGAAAGAAGGTTAGGGCGAAGACTCCAACATCTGAACAGTTGGCATCCTTAAATCTTAAGGAAGGGAAGAACATAGTGACCTTCACTTTTTCTACTGCTATGCTGGGGAAGCAGCAGGTTGAAGCTCAAATATATTTGTGGAAATGGAACGGTCGTATAGTGATTTCAGATGTGGATGGGACAATAACAAGGTCAGATGTTCTAGGACAGTTCATGCCTTTGGTTGGAGTAGACTGGTCACAGACAGGAGTTGCACATTTATTCTCTGCTATCAAGGAAAATGGTTACCACCTGCTTTTTCTTAGTGCTCGTGCAATTTCTCAAGCCTATCATACCAGACAATTCCTATTCAACCTTAAGCAGAATGGGAAAGTTTTACCGGAGGGTCCTGTTCTTATTTCCCCCGATGGACTTTTCCCCTCCTTATTTCGAGAAGTTATCAGGAGGGCTCCTCATGAATTCAAAATTGCATGCTTAGAGGACGTCAGGGCACTCTTTCCTGCTGATTGCAATCCATTCTATGCTGGTTTTGGAAATAGGGATACAGATGAAATAAGCTACCTTAAGGTGGGAATaccaaaaggaaaaatattCACCATCAATCCCAAGGGTGAGGTTGCTGTAGACCGTCGTCTTGATACAAAGTCATATACTTCTCTTCATGCTCTTGTTAATGGAATGTTCCCTCCTATGAACTCATCTGAGCAGGAGGATTTCAACTCGTGGAATTTCTGGAAGCTACCTCCTCCTGTTATAGATATTTGA 2958 0.4216 MQAMERLGSYLSRGVYTVSGPFHPFGGAVDIVVVEQPDGSFKSSPWYVRFGKFQGILKAKERVVNIDVNGAEADFHMYLDHKGEAFFLRDVDAEDGESIMCPSCSSHETDSRAQDNKRPLKSKSCNFDLDQSNSVTQIDISNGKLLARTNSRRSRILGFVLGRRSKKGINNIHGEVDDPGINRVDSLERAEIAANLLDIRWSTNLAGDKPPPKNSIKTQESSSSPDNVANGFDQRKLDKKACSCCKQEGISSKSENFMEGKTEVITEISAITDAAEDNEGNTKVKEVVYGSTGSDLQVACVKLETHIEEELSGEEVSSVSTVDMPVYGSPEKEFSTNEVQSLVYCKMSESSTVGVDCSSEQTHAVLYLAGGECQEVHVQAGILRATTVLLPEVTNTEEVSKNISLGMPVMEVSEFHSGVNNYSMADAKDTLCEKVQSNCGSSTSSYSSLDNQLLDENNKKGNGVSSTLLAPVESVGDCVLSKITSRPPSANSEEDCFLFRDLDEFGITDQFEGSISPDYIDKEDDLSYVDDTKKVNHLADAIYNSHSSPESSSSDNKTDDLKLSSTCYPINVTRNKVVREEVELHTGSLPNISSHKNSLGKHDVCYPLSQSLDSKSKSLKYTFPGKDYSKCLKSDGHTENQLINEEPGDKDNHSSRDFKSAVPNPPFGDPSRINPSPGGNWGLWPFSFRRSRSGTAMLPAPSDANITTSGNATERTISIDVDKNELKPNPTRKKVRAKTPTSEQLASLNLKEGKNIVTFTFSTAMLGKQQVEAQIYLWKWNGRIVISDVDGTITRSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYHLLFLSARAISQAYHTRQFLFNLKQNGKVLPEGPVLISPDGLFPSLFREVIRRAPHEFKIACLEDVRALFPADCNPFYAGFGNRDTDEISYLKVGIPKGKIFTINPKGEVAVDRRLDTKSYTSLHALVNGMFPPMNSSEQEDFNSWNFWKLPPPVIDI 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3560 985 Pfam lipin, N-terminal conserved region 12 96 IPR007651 -
Sto9g3560 985 Pfam LNS2 (Lipin/Ned1/Smp2) 739 960 IPR013209 -
Sto9g3560 985 PANTHER LIPIN 1 984 IPR026058 -
Sto9g3560 985 MobiDBLite consensus disorder prediction 633 657 - -
Sto9g3560 985 MobiDBLite consensus disorder prediction 214 230 - -
Sto9g3560 985 MobiDBLite consensus disorder prediction 721 740 - -
Sto9g3560 985 PANTHER GH19076P 1 984 - -
Sto9g3560 985 SMART lns2 784 940 IPR031315 -
Sto9g3560 985 SUPERFAMILY HAD-like 776 930 IPR036412 -
Sto9g3560 985 MobiDBLite consensus disorder prediction 203 231 - -
Sto9g3560 985 MobiDBLite consensus disorder prediction 633 678 - -
Sto9g3560 985 MobiDBLite consensus disorder prediction 695 714 - -
Sto9g3560 985 MobiDBLite consensus disorder prediction 698 714 - -
Sto9g3560 985 MobiDBLite consensus disorder prediction 721 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3560 Sto-Chr9 34535806 34541550 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1199 5 8086643 8091882 Sto9g3560 9 34535806 34541550 CCT
Sto9g3560 9 34535806 34541550 Sto9g3560 9 34535806 34541550 ECH