Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3557 ATGGAATATGTTGAAGTAAAGGCGCCTCTATCAGAATCGATTTCAAAGAGTGCTGAAGAGACGTCGCTGGCAGAATGCCCTAAAGAAAATTATGAAGTGATAAATCCACCTCCAACCAGCCAGCTTAGTAATGGAAAAGTGGAGTCTGTCACAACCGCAGGTGTGTCAATGACTAAATTAGCAACATCACCAAATGCTTTGGATGATCAAATTGTAAGAAAAGATGAGTTTTCTCCTACAGATAATTCAACTTCAACCTCAAATGCTATGGTTGACGAGGTACAAAGAAGCATTAAGGAAACTGTTATTGAAAATTCCGAACCAAGAGTTGTAGAAGATATCTCTGGCGGGCAACAAGTGCAAGATGGCCATCCAACTGTCGCTTCTAACATTGATGATCATGACGAGAATATACTTTCTACTTCCCTTTCTGAAACAAAAGATTTGCAGAATGATGGACTAAAGATTGATCAACCTCTAATAGAGGTTTCCAGTGCTACTAAAGTCTTGGGAATGATGGACACTAATGATCATAATGAAATCACACTATCAACTTTCTCTTCAGAAGTAAAGGATTTGCAAAATGGTCATAATGAACTAAAGATTGATCCACCTCAAATAGAGGTTTCCTGTGCTACCGAAGTGTTGGAAACAATTGACACTCATGATTATAATGAGATTAGACTATCAGATTCTTCTTCTAAAATTAAAGATTTGCAGAATGACCATAGTGAACTAAAGATTGATCTGCCTCAAGTAAAGGTTTCTGATGCTACTTCTGAAGGCTTGGGAAAAATAGATAGTGATGATCATAATGAGATTATATTATCATGTTCCAACTCTGAAACAAAAGATTTTTCGAACGACCATAGTGAACTAGAGACTGATGAACCTCAAATAAAGGTTGACCGTGTAGCTGCTGAAGTCTTGGGAACGGTTGACAATGATGATCATAATGAGATTATAACATTTGATTCCCCATTTGAAACAAAAGATTCGCCGAAAGATCAGAGTGAAGTCTTGGGAATGTGCGAAACTCCTACAACTGCCAAGAAGGCCGCCTTTATAGATACAGCAGCTCCAATTGAATCTGTCAAGGCAGCTGTTTCCAAATTTGGAGGAATTGTGGATTGGAAGGCTCATAGAAACCAAACTGTGGAGAGACGCCAACACGTAGAGCAAGAACTTGAGAAAGCACAGGAGGAGATCCCAGGGTACAGGAAACAAGCAGAGTCTGCTGAAAAGGCAAAAATCCAAGTATTAAAGGATCTGGATAGCACCAAGAGATTAATTGAAGAACTAAAACTTAACCTAGAGAGGGCACAAACAGAAGAACGCCAAGCTAGACAGGACTCAGAACTTGCAAGGCTCAGAGTAGAAGAGATGGAGCAAGGCATTGCAGATGAATCTAGTGTTGCAGCCAAGGCACAACTTGAGGTTGCTAAAGCTAGGTTTACAGCAGCTGTTTCTGAGTTAACATTTGTGAAAGAAGAATTGGAAGCATTACGCAAGGAATATTCTTCATTAGAGGTTGAAAAGGATGTAGCCATTAAAAAAGCTGAAGAGGCTGTTATAGCATCAAAAGAAGTAGAGAAGACAGTAGAAGATTTGACTATTGAATTAATTGCTGTAAAAGAATCGTTTGAATCTGCACATTCTGCACACTTGGAAGCAGAGGAAAAAAGAATAGGAACAATCATGGCAAGAGATCACGATTCTCTCAACTGGGAGAAGGACCTTAAGCAAGCAGAAGAAGAGATTCAAAGACTAAGCCAGGAAATTATGTTAACCAAggatctcaaatttaaactagaCAAGGCCTCTGCTTTGCTGATTGATTTGAAAGCTGAATTAGCTTCTTATATGGAATCAAAGTTGAAGCTGGAAGGCGATGAAGAAAGAATCTCGAAAGAAGACCTAGAGGAACCAGAGAAGAAGGCACACACTGAAATATTGGCAATTGTGGCATCAGCTAGAAAAGAACTTGAGGAAGTAAAGTTTAATCTAGACAAAGCAACTAATGAGGTTAACTGCTTGAAGGTGGCTGCGGTATCACTTAAATCAGAACTTGAACAAGAGAACTCATCTCTTACCACCATTAGGCAAAGAGAGGGAATGGCCTCCATTGCAGTTGCTTCCCTTGAAGCTGAATTGGATAAGACTAGATCTGAAATAGCTTTGGTAAAGATGAAGGAGAAAGAAGCCAAAGAGAAAATGGTTGATCTGCCAAAGAAACTACAACAAGCTGCTGAAGAGGCTAATAAGGCCAACTTACTTGCTCAAGAAGCTCGTGAAGAGTTGCGAAAAGTAAAGGGTGAGGCAGAGCAAGCCAAGGCTGGAGCAAGTACAATGGAAAGTAGATTACTTGCAGCTCAAAAGGAGATAGAGGCTGCCAGGGCTTCAGAGAAGTTGGCAATAGCAGCCATTAAAGCATTACAAGAGAGTGAATCAGCTAGAAGCAACAATGATGTGGACAAATCCAATGGGGTCACTCTTTCGTTGGAGGAATACTATGAGCTTAACAAACGAGCTCTTGAGGCAGAAGAGCAGGCCAATATGAGGGTTGCAGCTGCTAATTCTGATATTGACATAGCTAGAGAGTCTGAATTGAAAACCTTGGCAACATTGGAAGAAGTGAATGAAGAGATTTCTACTAGAAGGGAATCTTTGAAGGTGGCAATGGAAAAGGCTGAGAAGGCAAAAGAAGGAAAATTAATTGTAGAACAAGAGTTAAGAAAGTGGAGGGCTGAACATGAGCAAAAAAGAAAGGCGGGTGAGTCTGATCCAGGAGTAGATAAAAGCTCAAGTGTTAGTTTTGAGGGGAGTAAGGAAGAAGATCACAATGAACAAGCTCCTGAGGAAGTTAGTAATGTacaaaatttatcaaattcaaagGTTGGATCATCCCCAGAAACGAAGaatgcatactctaatcgtCCACACTTGGTGTACATGTCTATTAGAGCAGTTCCTGTGAAATCTTCCATTTCTATATTGCTCCTTAAGACATGGTTATGCAATGTTTCCCCAGACCGCAGAGCTTGGATGAAATACCCAACTACTGACTTTATATCACCTTTCTCAGAACAGCTTGACATGATTGCTGTTAAGGAAATCAGAAGGCTTATCATTGTCACGGGACTGGGTTGCACACCATCATCTAGCATCTCTTTGAAGCAAATCATTGCCTTATCCAAGAAGCCATTTTGA 3210 0.396 MEYVEVKAPLSESISKSAEETSLAECPKENYEVINPPPTSQLSNGKVESVTTAGVSMTKLATSPNALDDQIVRKDEFSPTDNSTSTSNAMVDEVQRSIKETVIENSEPRVVEDISGGQQVQDGHPTVASNIDDHDENILSTSLSETKDLQNDGLKIDQPLIEVSSATKVLGMMDTNDHNEITLSTFSSEVKDLQNGHNELKIDPPQIEVSCATEVLETIDTHDYNEIRLSDSSSKIKDLQNDHSELKIDLPQVKVSDATSEGLGKIDSDDHNEIILSCSNSETKDFSNDHSELETDEPQIKVDRVAAEVLGTVDNDDHNEIITFDSPFETKDSPKDQSEVLGMCETPTTAKKAAFIDTAAPIESVKAAVSKFGGIVDWKAHRNQTVERRQHVEQELEKAQEEIPGYRKQAESAEKAKIQVLKDLDSTKRLIEELKLNLERAQTEERQARQDSELARLRVEEMEQGIADESSVAAKAQLEVAKARFTAAVSELTFVKEELEALRKEYSSLEVEKDVAIKKAEEAVIASKEVEKTVEDLTIELIAVKESFESAHSAHLEAEEKRIGTIMARDHDSLNWEKDLKQAEEEIQRLSQEIMLTKDLKFKLDKASALLIDLKAELASYMESKLKLEGDEERISKEDLEEPEKKAHTEILAIVASARKELEEVKFNLDKATNEVNCLKVAAVSLKSELEQENSSLTTIRQREGMASIAVASLEAELDKTRSEIALVKMKEKEAKEKMVDLPKKLQQAAEEANKANLLAQEAREELRKVKGEAEQAKAGASTMESRLLAAQKEIEAARASEKLAIAAIKALQESESARSNNDVDKSNGVTLSLEEYYELNKRALEAEEQANMRVAAANSDIDIARESELKTLATLEEVNEEISTRRESLKVAMEKAEKAKEGKLIVEQELRKWRAEHEQKRKAGESDPGVDKSSSVSFEGSKEEDHNEQAPEEVSNVQNLSNSKVGSSPETKNAYSNRPHLVYMSIRAVPVKSSISILLLKTWLCNVSPDRRAWMKYPTTDFISPFSEQLDMIAVKEIRRLIIVTGLGCTPSSSISLKQIIALSKKPF 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3557 1069 Coils Coil 655 689 - -
Sto9g3557 1069 Coils Coil 604 624 - -
Sto9g3557 1069 Coils Coil 873 900 - -
Sto9g3557 1069 Coils Coil 746 801 - -
Sto9g3557 1069 MobiDBLite consensus disorder prediction 953 974 - -
Sto9g3557 1069 MobiDBLite consensus disorder prediction 938 952 - -
Sto9g3557 1069 Coils Coil 424 460 - -
Sto9g3557 1069 MobiDBLite consensus disorder prediction 1 48 - -
Sto9g3557 1069 Coils Coil 711 738 - -
Sto9g3557 1069 MobiDBLite consensus disorder prediction 917 974 - -
Sto9g3557 1069 Pfam Weak chloroplast movement under blue light 355 921 IPR008545 -
Sto9g3557 1069 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 291 965 - -
Sto9g3557 1069 Coils Coil 573 600 - -
Sto9g3557 1069 Coils Coil 485 519 - -
Sto9g3557 1069 PANTHER WEB FAMILY PROTEIN-RELATED 291 965 - -
Sto9g3557 1069 Coils Coil 229 249 - -
Sto9g3557 1069 Coils Coil 382 416 - -
Sto9g3557 1069 MobiDBLite consensus disorder prediction 34 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3557 Sto-Chr9 34516725 34522065 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1191 5 8030663 8034396 Sto9g3557 9 34516725 34522065 CCT
Sto9g3557 9 34516725 34522065 Sto9g3557 9 34516725 34522065 ECH