Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3523 ATGGGGGGTTGGGCTATAGCCGTGCACGGTGGCGCTGGTGTGGACCCTAATCTCCCACCCCACCGTCAAGAACAAGCCAAACAACTCCTCACCCGCTGTCTCCATCTCGGCATCTCCGCCCTCAATTCCAATCTCCCCGCCATCGATGTCGTCGAACTCGTCGTGAGAGAACTGGAAACAGATCCTTTGTTCAACTCAGGACGAGGATCTGCGCTGACAGAAAAGGGGACGGTAGAAATGGAGGCTAGCATCATGGATGGTACCAAAAGAAGATGCGGTGCCGTTTCGGGCGTAACTACCGTCAAAAATCCCATCTCACTTGCCCGCTTGGTCATGGATAAATCTCCTCATTCCTACCTCGCTTTCTCCGGCGCTGAACAATTCGCAAGGCAACAGATTGTGGACAACGATTACTTCATCACTCCTGAAAATGTTGGCATGCTGAAGCTCGCAAAGGAAGCCAATGCCATTCTGTTTGATTACAGGATCCCAATCGAAACATGCGGCGCAGGAGCAGGAAAAGAGAAGGCGTTGCAGATGAATGGGCTGCCCATCAGCGTGTACGCGCCGGAGACGGTTGGGTGCGTGGTAGTGGACAGTGAGGGAGCGTGTGCAGCTGCCACGTCAACAGGGGGCCTCATGAACAAAATGACCGGGACATACGCCTGTGAGTTGTGTGGGGTATCCTGCACCGGGGAAGGGGAGGCCATCATACGTGCAACACTGGCGCGTGAGGTGGCAGCTGTGATGGAGTACAAAGGACTGCGCCTTCAACAAGCAGTGGACTTCGTCATAAAGGAAAGGCTCGACCAAGGCATGGCTGGCTTGATAGCCGTATCCAACACTGGCGAAGTCGCCTATGGCTTCAACTGTAATGGAATGTTTAGGGGATGCGCCACCCAGGATGGCTTCATGGAAGTTGGAATCTGGGAATAA 936 0.5406 MGGWAIAVHGGAGVDPNLPPHRQEQAKQLLTRCLHLGISALNSNLPAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGTKRRCGAVSGVTTVKNPISLARLVMDKSPHSYLAFSGAEQFARQQIVDNDYFITPENVGMLKLAKEANAILFDYRIPIETCGAGAGKEKALQMNGLPISVYAPETVGCVVVDSEGACAAATSTGGLMNKMTGTYACELCGVSCTGEGEAIIRATLAREVAAVMEYKGLRLQQAVDFVIKERLDQGMAGLIAVSNTGEVAYGFNCNGMFRGCATQDGFMEVGIWE 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3523 311 CDD Asparaginase_2 5 303 - -
Sto9g3523 311 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 311 - -
Sto9g3523 311 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 308 IPR029055 -
Sto9g3523 311 Pfam Asparaginase 4 310 IPR000246 GO:0016787
Sto9g3523 311 PANTHER L-ASPARAGINASE 1 311 IPR000246 GO:0016787
Sto9g3523 311 Gene3D (Glycosyl)asparaginase 192 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3523 Sto-Chr9 34347995 34349277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3523 6 245 Miscellaneous Gene Families AT4G00590 27.500 5.81e-11 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1152 5 7693398 7693718 Sto9g3523 9 34347995 34349277 CCT
Sto9g3523 9 34347995 34349277 Sto9g3523 9 34347995 34349277 ECH