Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3494 ATGGATGCCGAAACCATAGTTGATTTTTCTTTAAATGAGGCTGGGAGGATGGATCAGTTAAGACTTCTAAGGTTGAAAGCTGTGCTTCAGATTGCTCAGCAGCAACCCAAGCAAACAATGGATATCCACAGAAAATCCAGATTACATTCCCAGCATATTTCAACTGCAGAGTTGTTGCTGAAACTAGGTATGCAATCACTTCCTATTGCAAGAAGTTTTTTAATGAATGCTTTGCGGTTAGAACCAACAAACTATCTTGCATGGTTCAACCTCGGATTGGTTTCAAAATTTGAAGGTTCATTACAACAAGCAGCAGATTTCTTTCAGGCTGCTTATGAGCTTAAGCTTTCATCTCCAGTTCAGAAATTTAAGTAA 375 0.3867 MDAETIVDFSLNEAGRMDQLRLLRLKAVLQIAQQQPKQTMDIHRKSRLHSQHISTAELLLKLGMQSLPIARSFLMNALRLEPTNYLAWFNLGLVSKFEGSLQQAADFFQAAYELKLSSPVQKFK 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3494 124 Gene3D Tetratricopeptide repeat domain 9 119 IPR011990 GO:0005515
Sto9g3494 124 PANTHER PROTEIN NPGR1 2 44 - -
Sto9g3494 124 PANTHER PROTEIN NPGR1 53 124 - -
Sto9g3494 124 SUPERFAMILY TPR-like 51 114 IPR011990 GO:0005515
Sto9g3494 124 PANTHER PROTEIN NPG1 53 124 IPR043376 -
Sto9g3494 124 PANTHER PROTEIN NPG1 2 44 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3494 Sto-Chr9 34199958 34200940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3494 2 40 Calmodulin-binding Proteins AT1G27460 61.538 5.06e-11 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1105 5 7426358 7429227 Sto9g3494 9 34199958 34200940 CCT
Sto9g3494 9 34199958 34200940 Sto9g3494 9 34199958 34200940 ECH