Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2924 ATGCGAATTCAAAAGTCCGTTTTACAGAGCATTTCCCTCTTGGTACTTCTGCTGGTTTTAATAATCAATATAACTCATGTGAGCTGCAAATCTACAATCGAGCCCTGCTCAAATGCCGATTCGTGCAATGCCCTGCTCGGATACACCCTCTACACTGACCTCAAGGTCTCTGAGGTAGCTTCCCTCTTTCAAATCGACCCTATTGCCCTTCTCACTGCCAATGCCATTGACATCTCTTACCCCGACGTAGAGCATCACATCCTTCCCTCACGGCTCTTCCTCAAAATCCCCATTTCTTGTTCTTGTGTTGATGGAATTCGCAAATCAGTGTCCACTCATTACAAAACTCGTCCCTCTGACACTCTCTCGTCCATTGCTGACTCCATATATGGGGGTCTGGTGTCTGCTGACCAGCTTAGGGAGGCCAATTCGATAACTGACCCTTCAGTACTGGATGCGGGCCAGAATCTCGTGGTGCCACTTCCATGCACTTGCTTCAATGGGACTGATAACTCTTTGCCTGCTATCTACCTGTCGTATGTGGTGAAGCCAATTGATACTTTGGCTGCAATTGCTGCCAGGTATTTCACCACTCTTACTGATTTGATGAATGTCAATGCCATGGGGAGTACAGCTATAAACGATGGTGATATTCTCGCTATACCAATACCAGCTTGCGCATCAGATTTCCCAAAATATGCCTCTGATCATGGCTTGCTTGTCCCTAACGGAAGCTATGCCATTACAGCAGGACACTGCGTGCAATGTAGCTGTGGGCCACAAAATTTAAATTTATATTGTATGCCTGCTTCTCTGGCTGTTTCTTGTTCTAGCATGCAATGCAAAAGAAGCAATCTTATGCTCGGGAATGTTACAGTGAAACAGGGTGGTGGTGGCTGCAATGTTAATTCTTGTAGTTATGGTGGTTTTGTTAATGGCACCATAATAACAGCGTTGTCTGCATCTCTTCAACCTCGATGCCCAGGGCCGCAGCAATTCCCTCCACTTGTAGCTCCGCCTACTTCTGTTGCGAGGGATTCAATATTTGCACCAGCACCATCACCTCTGTCAGATGGAGCTGGTTCATTATCACCCAGATCTTCGGTGGTGCCAGGAACTAGGTCAATTCCAGGATTCCAACCTGCAAATGGCCCTATGAGTGGCCTTACTTCCGGTGCTTCTGGTGCTTGCTCCTCAGTGAAGCCATTACCCATTTTGACATCTGCACTTGTGTTTTTGCTTGTTAAGTTCATGATATCTTTGGCATTGTAA 1272 0.4646 MRIQKSVLQSISLLVLLLVLIINITHVSCKSTIEPCSNADSCNALLGYTLYTDLKVSEVASLFQIDPIALLTANAIDISYPDVEHHILPSRLFLKIPISCSCVDGIRKSVSTHYKTRPSDTLSSIADSIYGGLVSADQLREANSITDPSVLDAGQNLVVPLPCTCFNGTDNSLPAIYLSYVVKPIDTLAAIAARYFTTLTDLMNVNAMGSTAINDGDILAIPIPACASDFPKYASDHGLLVPNGSYAITAGHCVQCSCGPQNLNLYCMPASLAVSCSSMQCKRSNLMLGNVTVKQGGGGCNVNSCSYGGFVNGTIITALSASLQPRCPGPQQFPPLVAPPTSVARDSIFAPAPSPLSDGAGSLSPRSSVVPGTRSIPGFQPANGPMSGLTSGASGACSSVKPLPILTSALVFLLVKFMISLAL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2924 423 Gene3D LysM domain 168 229 IPR036779 -
Sto9g2924 423 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 3 17 414 - -
Sto9g2924 423 Pfam LysM domain 114 160 IPR018392 -
Sto9g2924 423 Pfam LysM domain 180 222 IPR018392 -
Sto9g2924 423 ProSiteProfiles LysM domain profile. 178 221 IPR018392 -
Sto9g2924 423 SUPERFAMILY LysM domain 112 161 IPR036779 -
Sto9g2924 423 MobiDBLite consensus disorder prediction 352 384 - -
Sto9g2924 423 MobiDBLite consensus disorder prediction 360 374 - -
Sto9g2924 423 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 17 414 - -
Sto9g2924 423 CDD LysM 112 159 IPR018392 -
Sto9g2924 423 CDD LysM 179 221 IPR018392 -
Sto9g2924 423 SMART LysM_2 179 222 IPR018392 -
Sto9g2924 423 SMART LysM_2 113 160 IPR018392 -
Sto9g2924 423 SUPERFAMILY LysM domain 178 223 IPR036779 -
Sto9g2924 423 ProSiteProfiles LysM domain profile. 112 159 IPR018392 -
Sto9g2924 423 Gene3D LysM domain 106 167 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2924 Sto-Chr9 30479393 30481574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2924 9 422 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 66.427 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2924 - - gmx:100808966 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2924 9 30479393 30481574 Sto9g2924 9 30479393 30481574 ECH