Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0571 ATGTATTTCTTTGAAGTCACAGTGGAAAAGATACGATTGTGCTTCAACAGATTTAGAACACCCTCAGTTATTTTGGGTATAGCTTTTGTTATACTATGCCTAATAACTTATAAAGACTCCATTTCTAATCATCTTGAGGGGTTTTCTAAAGATAAAGTATTTGGAGGGACAGTCCAAAATGTGGCATATGAGAGCTTGGGACCAAGAGTTCAGCCTAGTATAGGCTCAAATTcagTGTCAAAAAATGATTCATTTACGAATTCAAAACATGATTCATTTACAAATTCAACAAAGAATTCATTTAGGAATTCAACGAAGGACTCATTTACAAATTCAACAAAGGATTCATTTACAAATTCAACGAAGGATTCATCTCCACCTACCAGAAATTCTCCTATTGCAGACAAACTTCTTGATGGACTACTGGCTTTTGGGTTTGATGAAGCATCATCATCATGCTTGAGCAGGTTTGAGTCCTACCTATACCAAAAGGCTTCTTCTCCTCACAAACCCTCTTCATATCTAATATCCAAACTTCGAAAATACGAAGATCTTCACAAATTGTGTGGACCTCATACCTCACTCTACAACATAACCATGGCAGAGCTCACAAGAACTTCCACCAGAAAACATGGAGCTTCTACTTCCACAATGTGTAGCTACATCGTGTGGACCCCAGCGAATGGCTTAGGGAACAGAATGGTGAGCATGGCTTCAGCTTTCCTCTATGCTCTTCTCACAGACAGAGTCCTAATGGTGGAATTTGGGAGTGACATGGATGGTCTCTTTTGTGAGCCATTTCCCAATTCATCATGGAGATTGCCAAGTGACTTTCCTCTCAGTGAACTCGAAAAACATATCGAAACCTATCAAAAAATGGTGAATAAGGACAGAGAAAACAGTTCAAGTTCAAGGCATATTTCTTCACCATTGGTTCTTCATCTAAATCTACAACACTCCTCTGAGGATCCTGAGAAGTTTTTCCACTGTGATCATAGTCAAGCTCTTTTACATGAAGTTCCTATGTTGATTCTGAGATCAGATCAGTATTTTGTACCTTCTTTGTTCCTAACTCCATCTTTCAGGCAAGAGCTAAGCAAGATGTTCCCCGAGAAAGACACCGTTTTCCACCATCTCGGGCGGTACCTATTTCTACCTTCAAATGAGATATGGGGCAAAATCTGCAGGTTCTATCAGGCATACATGGAGAAAGCAGATGAGAGGATTGGCCTTCAAATAAGAGTCTTTAGTCCAGATCGTACTCCGAATGAAGTAATTATGGACCAAATTCTAAGATGCACACTAAAGAATAAGGTTCTTCCCGACCTAGGCACGCGAGATGATTCTTTAACGACGAATTCTTCCTTGAAAAACCAGACTTTGAAGTCTGTTCTGGTTACATCTTTGCATTCATACTATGGTGAGAATCTGAGGACTATGTATTTGACAAAACCAACTGTTTCTGGGGAGATAGTGGGAGTTTTTCAGCCAAGTCATGAGGAGAATCAAAAGTTTAATGACAATAGGCACAACATGAGGGCTTTGATAGAGATCTATTTGTTGAGTTTGTGTGATGTTTTGGTGACTAGCTCTGTGTCTTCTTTTGGGTATGTGGCTCAAAGTTTGGGAGCATTGAAGCCATGGGTTCTGCATAAGTTATTGGACAAGAATATCCCTGATCCACCATGTGTGCTAGACTTTTCCATTGAGCCATGTTTTCATAGTCCACCTAAGCATGATTGCTTGGGAAAGCCTATGGATCATGATGGTAAAGATTTTCCTTATGCTAGGCCATGTGTGGACTTTGATTTTGGAATGAAGATGTTGTTGTCCAAGAACAACCAATGCAAAGAAGACAAGTTCAAAGGTGAGGAAAAGGGTTGTCCCCACAACTTGTTTCCTGATAACACCAAGTATCTTAATGAAGAGCAACCTCTCCACAAAGACTTCGGAATTTCACCAGAAAAATGGTTTCTACTCAAgtccaaaatttccaaattGGACATGTTTCCAAATGATGTAGAAACCCCACCATCAAATCCATTTCCTGAAAGATTCAGATACTGCAAATTAATCAAAGGAAGAGGGAGTCGATCTGCGTCGGCCGTAATCGGGAGCACAAAAGGTCCAGTGAAGGAGTTGTGA 2145 0.3972 MYFFEVTVEKIRLCFNRFRTPSVILGIAFVILCLITYKDSISNHLEGFSKDKVFGGTVQNVAYESLGPRVQPSIGSNSVSKNDSFTNSKHDSFTNSTKNSFRNSTKDSFTNSTKDSFTNSTKDSSPPTRNSPIADKLLDGLLAFGFDEASSSCLSRFESYLYQKASSPHKPSSYLISKLRKYEDLHKLCGPHTSLYNITMAELTRTSTRKHGASTSTMCSYIVWTPANGLGNRMVSMASAFLYALLTDRVLMVEFGSDMDGLFCEPFPNSSWRLPSDFPLSELEKHIETYQKMVNKDRENSSSSRHISSPLVLHLNLQHSSEDPEKFFHCDHSQALLHEVPMLILRSDQYFVPSLFLTPSFRQELSKMFPEKDTVFHHLGRYLFLPSNEIWGKICRFYQAYMEKADERIGLQIRVFSPDRTPNEVIMDQILRCTLKNKVLPDLGTRDDSLTTNSSLKNQTLKSVLVTSLHSYYGENLRTMYLTKPTVSGEIVGVFQPSHEENQKFNDNRHNMRALIEIYLLSLCDVLVTSSVSSFGYVAQSLGALKPWVLHKLLDKNIPDPPCVLDFSIEPCFHSPPKHDCLGKPMDHDGKDFPYARPCVDFDFGMKMLLSKNNQCKEDKFKGEEKGCPHNLFPDNTKYLNEEQPLHKDFGISPEKWFLLKSKISKLDMFPNDVETPPSNPFPERFRYCKLIKGRGSRSASAVIGSTKGPVKEL 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0571 714 Coils Coil 280 300 - -
Sto9g0571 714 Gene3D - 462 552 - -
Sto9g0571 714 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 19 609 - -
Sto9g0571 714 MobiDBLite consensus disorder prediction 73 131 - -
Sto9g0571 714 Pfam Xyloglucan fucosyltransferase 113 581 IPR004938 GO:0008107|GO:0016020|GO:0042546
Sto9g0571 714 Gene3D - 217 270 - -
Sto9g0571 714 PANTHER FUCOSYLTRANSFERASE 2-RELATED 19 609 IPR004938 GO:0008107|GO:0016020|GO:0042546
Sto9g0571 714 MobiDBLite consensus disorder prediction 73 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0571 Sto-Chr9 5571666 5577172 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0571 134 609 Xyloglucan Fucosyltransferase1 AT2G03220 49.896 1.17e-155 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0571 K13681 - gmx:100809919 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0571 9 5571666 5577172 Sto1g0088 1 557039 559748 PCT