Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0498 ATGCCAAAAAGTTCAGATCAAATTGCAGAGACTAGCCTTGGGCTGACTTCGAATAGCTCACCACCAATTACTCCTAAAACGCCGTCCGCCGTGTTTTTTCTAAAACGCTCTGTTTGCCGTAATTTCGAATCCGTCGGTCGTGCCACCGTCCGCCGTGCTGCCGTGTTTTTTACAGCCAGAATCCAACCACCACGTCTCGAGCTCGGATCTTCCTATCCGACGTGCAGAAGCGTTTTCGCACCACCGATGAATGCGATCGGTGCTTTCAGAAATACAATCACAACCGCTTCTATTCCTTCAGCCGCGAACACCAAGAATTTGGCCAAGAAGAAGAGACAGTCACTTAGTTTGGACGCACACCAGACACCACTCACCAGGTTGATCGGTTTCCCTCTTGCTGCTAGTAGAGTGACTGGGAAAGCACTTatgtttgatgaaattataaacTATGTGCAGTCATTGCAGCACCAAGTTGAGATACTTCAATCAAATAATGTCTGCCTACACCCAATATTCGCCTTAGATTCCTCAGCACAAGCCTTTTATGAAAACCAGCAAAACCCAGGAATCCACAATAACACTCTGAATGGAACTATGACCCACACCACAGTGGACCCATTAGAGACTGCTTCTCTCTGCCAAAACCTTGGTGTGCAAATGCAATTACCTTTCCTTAATGTCTTCACTACTGAAGCTGCTCCTCAGTTTCCAGTAACATTTTGTGAGGATGACCTCTACACAATTGTTCAGCAGGGCTTTGGCCAAACTGCAAGTGGGAAATTTCCCTCTCAGTCCCACGACTTGAACGATAACTATCAATCCTCAATAGATGATAACAGGCCAACAATATTCTTGAACTCTATTTTTGGCTGTTCTTTTATTGATAACAGGACAACAATATTCTTGAAGAATTTAAGTGCAAGAAATCAGGCAACCACTCTTAACTTCACCCAAAATGCTAATATTGATGGAACTATAGTTCAAAGCCCAAATGGTGTATTGGGTTCTGTAGACTACAAGAAGGAAGAAAGACTTGCCTTGGACATTAAATGTCGTGAGGCACCTCCAAGATTTGTTATTCCTGAACCTCAAAAATATATTGTCAAGATTTTCTTACAGATATCCACTGTAGCTTATTCTCATTATCTAGGATTTCTTAGGTTGCTGCAGTGGCTGTACTTGGTGTGCAACCAGAACCAAGTTATCGGTGGACGTCCTGCACTCCCTCATCCCTTTGGTATCGACCAAGCTGGGAGGGTTGCTCAGAATTTCAGACTGATAGCTCATGCTAAGCACAGGCAGAGGAAAGTCTTCATTAGGTGGATGAGGCTTAGTGGGTCACAGAAAATGCTGATCAAAGGCCAAATCAGGGATGGATTAAGCAAGCCTATTTTGTATGTTGTAGATACTTTTATGTTGGTGATGCAACTGGAAGAAAGGTATATGGCCACTCTTCTAACAACCATGCAATGA 1473 0.4331 MPKSSDQIAETSLGLTSNSSPPITPKTPSAVFFLKRSVCRNFESVGRATVRRAAVFFTARIQPPRLELGSSYPTCRSVFAPPMNAIGAFRNTITTASIPSAANTKNLAKKKRQSLSLDAHQTPLTRLIGFPLAASRVTGKALMFDEIINYVQSLQHQVEILQSNNVCLHPIFALDSSAQAFYENQQNPGIHNNTLNGTMTHTTVDPLETASLCQNLGVQMQLPFLNVFTTEAAPQFPVTFCEDDLYTIVQQGFGQTASGKFPSQSHDLNDNYQSSIDDNRPTIFLNSIFGCSFIDNRTTIFLKNLSARNQATTLNFTQNANIDGTIVQSPNGVLGSVDYKKEERLALDIKCREAPPRFVIPEPQKYIVKIFLQISTVAYSHYLGFLRLLQWLYLVCNQNQVIGGRPALPHPFGIDQAGRVAQNFRLIAHAKHRQRKVFIRWMRLSGSQKMLIKGQIRDGLSKPILYVVDTFMLVMQLEERYMATLLTTMQ 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0498 490 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 136 161 IPR024097 GO:0006355
Sto9g0498 490 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 161 273 IPR024097 GO:0006355
Sto9g0498 490 MobiDBLite consensus disorder prediction 1 22 - -
Sto9g0498 490 PANTHER BHLH TRANSCRIPTION FACTOR 161 273 - -
Sto9g0498 490 PANTHER BHLH TRANSCRIPTION FACTOR 136 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0498 Sto-Chr9 4848222 4854742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0498 101 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 32.500 3.81e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0498 - - gmx:100812081 150.214