Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2182 ATgttcatcaccatcatcattttACTCCACTTGGCTAATCTTATTCTATGTATCAATCCAAAATTTGAGGCTTGTGCACCTCAAAGTTGTGATGGGTATGGCCCAATCATAAAGTACCCTTTCTGGATTCCTCATAAACAATCTGCATTTTGTGGCCGTCCTCACTTTGAGATCTTCTGCAATCACAAGAAGCCAATCCTCAAAGTGTCTAATCAAGATTTTGTGGTTCAAAGTATCTCTAACTCTAACTTATCCATTGTTGTGACTAACAAATTAGCTGTCTATCAGGGAAAGTGCCCTGACCCCATGTATTACAGTTCCATTATTAAAACTCCATTTATCTATAGTTCTGAGAATTCCAACATGTCTTTCTTCTACAACTGTACCAGAAAGCCTAAAGATTATCCCAATTACGAAGTAGGCTGTGTTAAAGATACTACCCATCATTCTTTTGCTGTTTTTCATAAGGAGGCACTTGTGGGCTACAAAAACTACATCCATAAGTGCCAATTGGTGATTGATGTGCCTGTGCACGTGCATGGTATTTCTAATTTCACTAGCTTAATGCGAATGAATTACACTGAGGTTTTGAAGATGGGGTTTATTTTGAAATGGACCTCACCACCAGAAGAAAATGATCACTGCCAGTTGTGTGAAAAAAGTGGTGGACGATGTGGTGGATTTGATAATTATAAATTCCTGTGCTTCTGTAAGGATAAAACTCATCTCAAAAGCTGTGGTGATGGTGTATCAGTAAGAAACAAAGTCATTGTAGGTGTGAGCGTTTTTGCATTCACTGTGATTGTGATGTCGATTGGGTTTGGTTTGTATAAGAGGAGACAGACGAAGAGGAGTTATGCAAAATCATACATAACACAATCATCATCATATACCACTTCTTATGATTCGTCGGTGGTGCAGATTGATGAGCACGGAAGTAAATATTTGGGGGCTCACGTCTTCACATATAGTGAATTGGAAGAGGCAACTAACCATTTTGATGCATCCAAAGAACTTGGAGATGGAGGCTTCGGAACAGTTTACTATGGCAAACTTCTGGACGGTCGTTGCGTTGCAGTGAAGCGTCTGTACGAGAACAACTACAAGAGAGTAGAGCAATTCCAGAACGAAGTCGCCATCTTGACGCGCTTGCGCCACCAAAACCTCGTCGCCCTCTACGGCTGCACCTCCCGCCACAGCCGCGAGCTCCTCCTCGTCTACGAGTACATCCCCAACGGCACCGTCGCCGACCACCTCCACGGCCCACGCGCCGCCTCCCCCACCCCCCTCCCCTGGAACATCCGCCTCAACATCGCCATCGAAACCGCCAGCGCCCTCGCCTACCTCCACGCCTCCGACATCATCCACCGCGACGTCAAAACCAACAACATCCTCCTCGACGACCACTTCTGCGTCAAAGTCGCCGACTTTGGCCTCTCCCGCCTCTTCCCCAACGACGTCACTCACATCTCCACCGCCCCACAAGGCACACCCGGGTATGTCGACCCGGAGTACCACGAATGCTACCAATTAACCGACAAGAGCGACGTGTACAGCTTCGGGGTAGTTCTGATCGAGCTGCTTTCGTCGATGCCGGCGGTGGACATCACGCGCCACCGGCACGAGATCAATTTGGCAACCATGGCTATCAATAAGATTCACAGCAGGAAGCTGGAGGAGTTGGTGGACCCGAGGCTTGGGTTCGAGAGGGATTATAAGGTGAGGAAGGAGGTGAGTGCGGTGGGGGAGCTGGCGTTTCAGTGCTTGCAGAGTGTGAAGGATATGAGGCCGTGCATGAGGGAAGTGGTGGAGGTTCTGAGGGATATAGAGAGTGATGGGAAGAGTAAGAGGATAGTGGCGGAGGTGATGGATATTTGTGAGGATGATGTTGTGTTGCTCAAGAATAATGATGACTTGCCTCCTCCAGAGGCTTCCCCTGATTCTAATGTGAGGTCCGCAAGGTTGACCAGCAAAATTGAATCAGAGCTCCCAAGGCTCGCAAGGTTGACCTTATGGTACTGTATGGGATCGGTTCTCTTGTATAAAGGCATAGCCTCACCAAATCAACACCACCCATCGCTTCCTTCTACAGTTCTACCTTCTCCTCGCAATCCCTACTCCAATCCAAACCCAGCGATTGAAGTAAAAACTGAGATTCGCATCCAAGTCACTGAAGATGAAAGGGAGGCTGCCTGGGGTTACGTTGTGGCGTGCTCGTGGGCATGA 2226 0.4744 MFITIIILLHLANLILCINPKFEACAPQSCDGYGPIIKYPFWIPHKQSAFCGRPHFEIFCNHKKPILKVSNQDFVVQSISNSNLSIVVTNKLAVYQGKCPDPMYYSSIIKTPFIYSSENSNMSFFYNCTRKPKDYPNYEVGCVKDTTHHSFAVFHKEALVGYKNYIHKCQLVIDVPVHVHGISNFTSLMRMNYTEVLKMGFILKWTSPPEENDHCQLCEKSGGRCGGFDNYKFLCFCKDKTHLKSCGDGVSVRNKVIVGVSVFAFTVIVMSIGFGLYKRRQTKRSYAKSYITQSSSYTTSYDSSVVQIDEHGSKYLGAHVFTYSELEEATNHFDASKELGDGGFGTVYYGKLLDGRCVAVKRLYENNYKRVEQFQNEVAILTRLRHQNLVALYGCTSRHSRELLLVYEYIPNGTVADHLHGPRAASPTPLPWNIRLNIAIETASALAYLHASDIIHRDVKTNNILLDDHFCVKVADFGLSRLFPNDVTHISTAPQGTPGYVDPEYHECYQLTDKSDVYSFGVVLIELLSSMPAVDITRHRHEINLATMAINKIHSRKLEELVDPRLGFERDYKVRKEVSAVGELAFQCLQSVKDMRPCMREVVEVLRDIESDGKSKRIVAEVMDICEDDVVLLKNNDDLPPPEASPDSNVRSARLTSKIESELPRLARLTLWYCMGSVLLYKGIASPNQHHPSLPSTVLPSPRNPYSNPNPAIEVKTEIRIQVTEDEREAAWGYVVACSWA 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2182 741 MobiDBLite consensus disorder prediction 691 711 - -
Sto8g2182 741 SMART serkin_6 333 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2182 741 Pfam Wall-associated receptor kinase galacturonan-binding 25 88 IPR025287 GO:0030247
Sto8g2182 741 ProSiteProfiles Protein kinase domain profile. 333 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2182 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Sto8g2182 741 Pfam Wall-associated receptor kinase C-terminal 154 240 IPR032872 -
Sto8g2182 741 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Sto8g2182 741 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 5 650 - -
Sto8g2182 741 Gene3D Transferase(Phosphotransferase) domain 1 410 628 - -
Sto8g2182 741 Gene3D Phosphorylase Kinase; domain 1 305 409 - -
Sto8g2182 741 Pfam Protein kinase domain 335 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2182 741 SUPERFAMILY Protein kinase-like (PK-like) 316 609 IPR011009 -
Sto8g2182 741 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 5 650 IPR044652 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2182 Sto-Chr8 14371932 14377624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2182 214 612 Receptor kinase-like Gene Family AT1G25390 53.960 2.47e-138 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Sto8g2182 Pkinase 2.9e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2182 8 14371932 14377624 Sto8g2182 8 14371932 14377624 ECH
Sto8g2182 8 14371932 14377624 Sto10g0574 10 4842466 4845533 ECH
Sto11g0672 11 7765807 7769572 Sto8g2182 8 14371932 14377624 ECH
Sto6g2737 6 34511181 34519735 Sto8g2182 8 14371932 14377624 ECH