Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2153 ATGCGCCTCAGCTGTAATGGTTGCCGAGTCCTCCGTAAAGGTTGCTCCGCCGATTGCCCCATTCGTCCCTGCCTCCAATGGATTCCGTCGCCTGAATCTCAATCCAACGCTACGCTCTTCCTCGCCAAATTCTACGGCCGCGCTGGCCTCATCAATCTCATCAATTCCGGTGCTCCTCATGTTCGTCCAGCGATTTTCAAGTCCTGGCTCTACGAAGCTTGCGGGCGGATCGTGAATCCGATCTTCGGCTCCGCCGGCTTGCTCTCTTCCGGGAGCTGGCACCTCTGTCAAGCCGCCGTGGAAGCCGTTCTAAGAGGCGCGCCGATCACGACGGTCTCGCTGGAGTCGGCTTGCGACGGCGTGAGCCCGCTGCTCAAATCGTGCGATATCCGGCACGTGGGCAGAAAGGGAAACAGTACCGCGTGTGTGTCTGATAAGCTACACAAGGTGGTGACGACGAGTGGGAGCCAATTCAAACGCGCCGGCGCGAAGCAGAAGAAGAAGCCGCAAGTAGTAGAGCCGGTGGTGATGGCTCATTCGGGGAGTGAATTGGATGGGTCGGGAGTGAGCGAGCACAGAAGTAGAGGCGGGAGTGTCAGCGGTGAAGCCGATAGCAGCACCGTGGAGACGGTGGAGGCTTCGCCGGCGCCGGCGAGGAGCGATGAGCGTAGCGAAGCCGAGGACGGGGAAGTGGAGCTGGAATTGACTCTGTGGTGGGGTCAAGATGGAAAGAGTAATAGAGATATGAACGGCTCTGATGCGAACACGTGTAAGCTACAAGTTGGAATTGATCACTGTGGTTAG 804 0.5821 MRLSCNGCRVLRKGCSADCPIRPCLQWIPSPESQSNATLFLAKFYGRAGLINLINSGAPHVRPAIFKSWLYEACGRIVNPIFGSAGLLSSGSWHLCQAAVEAVLRGAPITTVSLESACDGVSPLLKSCDIRHVGRKGNSTACVSDKLHKVVTTSGSQFKRAGAKQKKKPQVVEPVVMAHSGSELDGSGVSEHRSRGGSVSGEADSSTVETVEASPAPARSDERSEAEDGEVELELTLWWGQDGKSNRDMNGSDANTCKLQVGIDHCG 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2153 267 MobiDBLite consensus disorder prediction 180 230 - -
Sto8g2153 267 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 260 - -
Sto8g2153 267 MobiDBLite consensus disorder prediction 199 213 - -
Sto8g2153 267 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Sto8g2153 267 PANTHER LOB DOMAIN-CONTAINING PROTEIN 41-LIKE 1 260 - -
Sto8g2153 267 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2153 Sto-Chr8 14121685 14122606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2153 1 237 AS2 family AT3G02550 47.131 5.37e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto8g2153 LOB 6.2e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2153 8 14121685 14122606 Sto8g2153 8 14121685 14122606 ECH
Sto11g0707 11 8077303 8078235 Sto8g2153 8 14121685 14122606 ECH
Sto8g2153 8 14121685 14122606 Sto10g0539 10 4497109 4498202 ECH