Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2359 TTgcttatcagccggctgatacataCCCATCAGCCGATTGATAAGGTTTTGAACCTCATCCGGCCACTGTTGTTGTCTGCTTCCTTCTCCTTGCTTGGCTCTCGTCTTTCTCTCCAACTTCAGAAATGTGGAGAAAGGAGAATGTTGATGCTTGATAAGAGAGGCATGTTTGAAGTGAGAGATCCTGCTTTAAAGCTTTTCGGGAGAGATATTCCACTACACTCAACCACCACCGATTCGCCTCAAGTCATGAACAGGCATGATAAATCAACGAGAAATGAAGTAGATACACCTTTCAGATCCGGCAAGCAGAATGATCTTCCTGAAGAAGTTCAAGGTTTTGGAAGCATTCATAAAAATCCTACTCAGGAAGTAGAGGCTGAAGTAGTTGATAGAACTAAGGACTGCAAGGCTGCAAGTAGAGATAAAGACCATCAAGAGAAAGTTCTAAAGAAGCCAGACAAGGTTCTTCCGTGCCCTCGTTGCAACAGCTTGGAGACAAAATTTTGCTATTTCAACAATTACAATGTTAACCAACCTAGACATTTCTGCAAAAATTGCCAGAGATATTGGACAGCTGGGGGGACAATTAGAAATGTTCCAGTGGGGGCTGGAAAGCGTAAAAATAAGCACTCGGCATTGCCTGTCACCCCTGATGTAGTATCTATCACCCACACAGACACCAATTCTTCTACCCACTTGCATATCTCATCCAGTGGACATCCCACTGCTTCAAGACCTGTTGGAGGAATGGGAAATATCCCAAGTTTTGGGGTGGAAGCTCCTCTGTGTGAGTCTCTTGAAACTTTGTTAGATCTAAAAGGCCAGAAAAAAATTGGAGTTAACTCCTCTACTAATAGAGATGAATATGATAGTGAGGAGCTTTCCAGAGCTGCTGAATCCAGGGAGAAGGAATGCTCAGAAAATGGAAAAGAGCAGGTAGGTTTGCCACAACACTGTAATGGCTTTAATCCTTTACATCCAATTCATTATTATCCTGTACCTCCATGGGCTTACCAATGGGGCTCATGTTGGAATTCAATGGTATTTAGACCCAATCCTGCTTATATGGGTTCTGCAACCATGATGGCAGTTCCAGGTTTCAACGCACCAACAATAGAATTACCAGCAGCACCTTCTTTATATTGGGGTTGCTTGCCGAGCTGGACTAGTCAAAAGGAAGAGTCTCCATTGGTTGGATCTACATTTAGTGGTATTCCATCACCTTCATCTTCCACTAGCAGTAGTGTTTGTTCTGGTACTAAGTCTCCAACCTTAGGAAAACATTCTAGAGATATAAGTACTCAGGCAGGTGATACAGTGAAACAGAATCTTTGGGTTCCCAAGACTTTGAGAATTAATGATCCAGAAGAGGCTGCAAGGAGTTCTATATGGTCTACTTTGGGCACAAAGCCTGAACAGAGCAAACCCATTATTAAAGGCAGTGTTTTTAAATCTTTTGAACCTAAGTCAGATGCCAGTTCTAATATGTCAAAAACTGAAGAAATTCTAAGCGCAAACCCTGCTGCTTTGTGTCGCTCTGAATCCTTTCAGGAaagaatgtaa 1566 0.417 LLISRLIHTHQPIDKVLNLIRPLLLSASFSLLGSRLSLQLQKCGERRMLMLDKRGMFEVRDPALKLFGRDIPLHSTTTDSPQVMNRHDKSTRNEVDTPFRSGKQNDLPEEVQGFGSIHKNPTQEVEAEVVDRTKDCKAASRDKDHQEKVLKKPDKVLPCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTIRNVPVGAGKRKNKHSALPVTPDVVSITHTDTNSSTHLHISSSGHPTASRPVGGMGNIPSFGVEAPLCESLETLLDLKGQKKIGVNSSTNRDEYDSEELSRAAESREKECSENGKEQVGLPQHCNGFNPLHPIHYYPVPPWAYQWGSCWNSMVFRPNPAYMGSATMMAVPGFNAPTIELPAAPSLYWGCLPSWTSQKEESPLVGSTFSGIPSPSSSTSSSVCSGTKSPTLGKHSRDISTQAGDTVKQNLWVPKTLRINDPEEAARSSIWSTLGTKPEQSKPIIKGSVFKSFEPKSDASSNMSKTEEILSANPAALCRSESFQERM 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2359 521 PANTHER CYCLIC DOF FACTOR 2 80 521 IPR045174 GO:0003700|GO:0006355
Sto7g2359 521 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 80 521 - -
Sto7g2359 521 Pfam Dof domain, zinc finger 154 211 IPR003851 GO:0003677|GO:0006355
Sto7g2359 521 ProSitePatterns Zinc finger Dof-type signature. 159 195 IPR003851 GO:0003677|GO:0006355
Sto7g2359 521 MobiDBLite consensus disorder prediction 400 433 - -
Sto7g2359 521 ProSiteProfiles Zinc finger Dof-type profile. 157 211 IPR003851 GO:0003677|GO:0006355
Sto7g2359 521 MobiDBLite consensus disorder prediction 75 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2359 Sto-Chr7 29196761 29200434 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2359 129 519 C2C2-Dof Transcription Factor Family AT5G39660 36.493 8.01e-66 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Sto7g2359 zf-Dof 5.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2359 - - ccaj:109811729 496.893