Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2060 ATGAAATACTCAAGAAATTGCTCAGAAATGGAATCTAAAAATGGTCATTCACAACAACAACACCAAAATTCTGGACTTTTAAGGTACCATTCTGCTCCAAGCTCATTGCTGAAAAACCTAGTGGAAGAAGAAGCTTCTAGAGGATTGGATCATCATTATGACCCAAGTTCAGAAATGGAAGCTTCTAGAGGATGGAGAAGTGTGAAGAAACAAGAAGCAAGGGACTCTGTTTTCTCTCATGAtcatctattattattattattattattattattattattataccatAATTCTCATGAATTCCACAAGTTTCCaaatgcttcttcttcttcttcttcttcaagtgGAATGatgagaaataataataataggatGGATTGTGGGAATTTTGGCTCAAATCTTCTGATGAGGCAGAAGAGTTTTCCCTCCAATTTCTCACTTAcaaatgGATTGGGAGAGCAAGCTATAACATCATCTAGTGGATTGAATGCTAGAGATGACAATGATGATGACTTCATGTTTTCTGCTTCATATGCTTTGGAATCTCAGCATGCAGATGTTGTTGGATatcatcataataataataatggtttGAGTGAGCAATTGAGTTTGCCtagcttttcttcttctaagATGGCTTCCATGGAAAGGTTTCTTCAAATTAAAGGAAGTGTTCCTTCTAAGATTAGAGCCAAAAGAGGATTTGCAACACATCCAAGGAGCATTGCAGAGAGGATGAGAAGAACTAGGATCAGTGAAAGAATAAAGAAGCTTCAAGAACTTTTCCGAAAATCAAACAAGCAAACAAGCACAGCAGATATGTTAGATTTGGCAgttgattatataaaaaatctGCAACAAGAAGTTAAGATACTCACAGATACTAGAGCAAAGTGCACTTGCTTAAGCACTCAGAAACAGTACTCAAGACCTTGTGcctga 942 0.3185 MKYSRNCSEMESKNGHSQQQHQNSGLLRYHSAPSSLLKNLVEEEASRGLDHHYDPSSEMEASRGWRSVKKQEARDSVFSHDHLLLLLLLLLLLLYHNSHEFHKFPNASSSSSSSSGMMRNNNNRMDCGNFGSNLLMRQKSFPSNFSLTNGLGEQAITSSSGLNARDDNDDDFMFSASYALESQHADVVGYHHNNNNGLSEQLSLPSFSSSKMASMERFLQIKGSVPSKIRAKRGFATHPRSIAERMRRTRISERIKKLQELFRKSNKQTSTADMLDLAVDYIKNLQQEVKILTDTRAKCTCLSTQKQYSRPCA 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2060 313 Gene3D - 232 296 IPR036638 GO:0046983
Sto7g2060 313 Pfam Helix-loop-helix DNA-binding domain 240 286 IPR011598 GO:0046983
Sto7g2060 313 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 163 304 - -
Sto7g2060 313 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 18 146 - -
Sto7g2060 313 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 235 285 IPR011598 GO:0046983
Sto7g2060 313 SMART finulus 241 291 IPR011598 GO:0046983
Sto7g2060 313 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 163 304 - -
Sto7g2060 313 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 18 146 - -
Sto7g2060 313 MobiDBLite consensus disorder prediction 10 29 - -
Sto7g2060 313 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 237 298 IPR036638 GO:0046983
Sto7g2060 313 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2060 Sto-Chr7 26223026 26228025 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto7g2060 HLH 5e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2134 4 22799649 22803394 Sto7g2060 7 26223026 26228025 ECH
Sto7g2060 7 26223026 26228025 Sto7g2060 7 26223026 26228025 ECH