Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1983 ATGATGCAAGGAAGTGGACAAATAAGTGTGCCTCCAGGTTTCAGGTTCCACCCAACTGATGAGGAGCTTCTGTACTATTATCTGAGGAAGAAAGTCTCTTATGAAGCCATTGATCTTGATGTCATTCGAGAAGTTGATCTTAACAAACTCGAGCCTTGGGACCTCAAAGAAAAATGTAGGATAGGATCAGGCCCTCAAAATGAGTGGTACTTCTTCAGCCACAAAGACAAGAAGTACCCGACCGGGACACGGACGAATCGAGCTACGACGGCCGGGTTCTGGAAGGCGACCGGGAGGGACAAGGCCATATACCTAAGCAACTCCAAGAGGATTGGGATGAGGAAAACCCTAGTGTTCTACACTGGACGTGCTCCTCATGGCCAAAAGACTGACTGGATCATGCATGAGTATCGCCTTGAAGAAGATGATGCTGAGgttcaggAAGATGGGTGGGTGGTGTGCAGGGTATTCAAGAAGAAGAATCTGAACAGAGGATTCCAACCAGAAATGGAAGAATTggatcaccatcatcatcatcatcatcataacaATAATGAGCATCTAATCATAAGTGGTTCTTCTTCTAATAATAACTGCCTGCATCATCATCAAGTTCTAGAACCAAAACATCATCATCACACTACTAATAatattcatcatcttcatcataatCTTCATCATCAAGCACTTCTATATGATCATCATCACAACAACAATTTCGATGGATCAATGCACCTGCCTCAACTGTTCAGTCCGGAATCATGCATGAACCCCATGGACGTCGTCCTCGATTGCGCCGCCTCTCAGAACTTGCTTAGGCTCACATCAACCTCCACCACTACCACTACTACTCCTACCACCACACCAAGTAGTAATAACAATAATACTACTAGTGGAGGTGGAGGGCTTATTAGTAATCTCTTGCACCCACAAGGTCAtgataatcatcatcatcagagaATGGGTAGTGGTACTAATGGTGGAGGAGGAGATTGGTCATTCTTGGACAAGCTTCTTGCTAGTTCACAGCCACAGCAGGTACAACCAGGTGGTGGGGCTATGGGtggtgcttcttcttcttcttctttgaacCACAAGTTTCCATTTCATTACCTTGGTTGTGATCAGATTGATATTATGAAGTTCTCCAAGTAG 1155 0.4095 MMQGSGQISVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKEKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYLSNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLEEDDAEVQEDGWVVCRVFKKKNLNRGFQPEMEELDHHHHHHHHNNNEHLIISGSSSNNNCLHHHQVLEPKHHHHTTNNIHHLHHNLHHQALLYDHHHNNNFDGSMHLPQLFSPESCMNPMDVVLDCAASQNLLRLTSTSTTTTTTPTTTPSSNNNNTTSGGGGLISNLLHPQGHDNHHHQRMGSGTNGGGGDWSFLDKLLASSQPQQVQPGGGAMGGASSSSSLNHKFPFHYLGCDQIDIMKFSK 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1983 384 MobiDBLite consensus disorder prediction 276 328 - -
Sto7g1983 384 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
Sto7g1983 384 ProSiteProfiles NAC domain profile. 10 159 IPR003441 GO:0003677|GO:0006355
Sto7g1983 384 SUPERFAMILY NAC domain 5 159 IPR036093 GO:0003677|GO:0006355
Sto7g1983 384 PANTHER PROTEIN SOMBRERO 6 347 - -
Sto7g1983 384 Gene3D NAC domain 19 163 IPR036093 GO:0003677|GO:0006355
Sto7g1983 384 MobiDBLite consensus disorder prediction 276 304 - -
Sto7g1983 384 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1983 Sto-Chr7 25329457 25332321 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto7g1983 NAM 4.7e-38 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1983 7 25329457 25332321 Sto7g1983 7 25329457 25332321 ECH