Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1978 ATGAAGTACGTGTTGGTGACAGGTGGTGTTGTCAGTGGACTAGGAAAGGGGGTCACTGCTAGCAGTATTGGAGTCCTCCTCAAGGCCAGTGGTCTTCGAGTTACTTCTATCAAGattgACCCCTACCTGAATACTGATGCGGGGACTATGTCTCCTTTTGAGCATGGGGAGGTTTTTGTCTTAGATGATGGCGGCGAGGTTGACCTTGATCTGGGAAATTATGAGCGTTTCTTGGACATCAAATTAACTCGTGACAATAATATTACTACTGGGAAAATCTATCAGTCTGTTATTGAAAAGGAGAGAAGAGGCGATTATCTTGGAAAGACTGTTCAGGTTGTTCCACACATTACAGATGCCATCCAAGAGTGGATAGAGCGTGTCGCTAAGATACCAGTGGATGGAAAAGAAGGGTCTGCTGACGTTTGTGTCATTGAATTAGGTGGAACTATAGGTGATATTGAGTCTATGCCTTTCATTGAGGCACTTGGGCAATTTTCGTACCGAGTAGGCTCAGGCAACTTCTGTTTGGTTCATGTCAGCTTGGTGCCTGTTCTTAATGTTGTTGGTGAACAGAAAACAAAGCCAACTCAGCACAGTGTCCGACAACTTAGAGGATTAGGTTTGACCCCGGATATTCTAGCTTGTCGCAGCTCAAAGgaacttgatgaaaatattaaagCGAAACTTAGTCAATTTTGCCATGTACCGTTATCCAACATAGTTACCCTCCATGATGTTCCAAACATTTGGCACATTCCTTTGCTATTGAGAGATCAGAAGGCACATGAAGCAATCTTCAAAGCATTAAACTTGACAGGTGTTGCTATGGAGCCTAATTTGGACGAGTGGACTGCTAGAACAAAAGTTACTGACAAATTGCATGAAACAGTTAGAATTGCGATGGTAGGAAAATACACTGGCCTTTCAGATGCTTATCTTTCTGTTATAAAGGCACTTTTGCATGCTTCTGTTGCTCGCAATCGTAAACTTATTGTGGATTGGATTTCAGCAACGGATCTTGAAGATGCTACTGCCAAAGAGGATCCTGATGCCCATAAAGCTGCTTGGGTTCTTTTGAAGGGTGCTAATGGGGTTCTGGTTCCTGGAGGTTTTGGTGACAGAGGAGTGCAAGGGAAAATTCTTGCTGCAAAGTATGCTCGAGAAAACAATGTTCCATTTCTGGGCATTTGCCTGGGGATGCAAATTGCTGTCATTGAGTTTGCACGATCAGTTTTAGGTCTGCTCGATGCTAATAGTACAGAGTTTGATCCTGAAACCAAAAGCCCTTGTGTCATTTTTATGCCAGAGGGTTCAAAGACTCATATGGGAGGAACCATGCGTCTTGGTTCGAGGAGGACTTACTTCCAAGTTGCAGACTGCAAATCTGTTAAATTGTATGGTAATGCACATTTCATTGATGAGCGGCATCGGCATAGATATGAGGTTAATCCCGAGATGATATCCCAACTAGAGAACGCCGGTCTATCTTTTGTTGGCAAAGACGAAAGTGGGAGGCGAATGGAGATAGTTGAATTGCCTGGTCATCCTTTCTTTGTTGGCGTTCAGTTTCACCCTGAGTTCAAGTCCAGACCAGGGAAACCTTCGCCGCCCTTCTTAGGATTAATAGCAGCAGCATGTGAACCAAGGACAGTTCTACCAGCAAGCAATGGCCACAGCAGTAAGCTAAGTAGTGTGATATATAATAAAGGACATTCACCAATTTTGAGAGCACAACACAATGGAAATGGATTCAAATCTTCCAATGGTTCCTTAAATGGTGTGTATGTCAATGGGAATGGAGTATATGTGGATGGAAGTTGGGCTTTCGTCTCGGTTGTCCTCGGTTACTCTGTACAGTTATTGATGAGTGGGTAG 1878 0.4324 MKYVLVTGGVVSGLGKGVTASSIGVLLKASGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQEWIERVAKIPVDGKEGSADVCVIELGGTIGDIESMPFIEALGQFSYRVGSGNFCLVHVSLVPVLNVVGEQKTKPTQHSVRQLRGLGLTPDILACRSSKELDENIKAKLSQFCHVPLSNIVTLHDVPNIWHIPLLLRDQKAHEAIFKALNLTGVAMEPNLDEWTARTKVTDKLHETVRIAMVGKYTGLSDAYLSVIKALLHASVARNRKLIVDWISATDLEDATAKEDPDAHKAAWVLLKGANGVLVPGGFGDRGVQGKILAAKYARENNVPFLGICLGMQIAVIEFARSVLGLLDANSTEFDPETKSPCVIFMPEGSKTHMGGTMRLGSRRTYFQVADCKSVKLYGNAHFIDERHRHRYEVNPEMISQLENAGLSFVGKDESGRRMEIVELPGHPFFVGVQFHPEFKSRPGKPSPPFLGLIAAACEPRTVLPASNGHSSKLSSVIYNKGHSPILRAQHNGNGFKSSNGSLNGVYVNGNGVYVDGSWAFVSVVLGYSVQLLMSG 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1978 625 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Sto7g1978 625 Gene3D - 1 292 IPR027417 -
Sto7g1978 625 Gene3D - 294 556 IPR029062 -
Sto7g1978 625 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Sto7g1978 625 TIGRFAM PyrG: CTP synthase 1 545 IPR004468 GO:0003883|GO:0006221
Sto7g1978 625 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Sto7g1978 625 SUPERFAMILY Class I glutamine amidotransferase-like 297 548 IPR029062 -
Sto7g1978 625 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Sto7g1978 625 PANTHER CTP SYNTHASE 1 574 IPR004468 GO:0003883|GO:0006221
Sto7g1978 625 Pfam Glutamine amidotransferase class-I 309 544 IPR017926 -
Sto7g1978 625 PANTHER CTP SYNTHASE 1 574 - -
Sto7g1978 625 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Sto7g1978 625 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1978 Sto-Chr7 25276959 25284980 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1978 7 25276959 25284980 Sto7g1978 7 25276959 25284980 ECH