Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1936 ATGGCGACCTCTTCTCTCCTGAGATCTGCCGTTGTCTCTTCCTCCCGCACTGACCTCTCTCCTTCGCCTTCTCATATCTTCAAGGTGTCATGCAATCCCTCGAGTTGCAATCTGAAATCCATATGTTCAAAGTCTAGCATATTTGGAACTTCTCTCCCAATTGAATCACTGGTTTTTCAAAACTGCCATGCCCAGAGTATACAACCTATCAAAGCCACAGCTACTGAAATCCCTCTCCCTGTACAGaAATCAAGGAGCAGCGGGAAGACAAGAGTTGGAATTAATGGTTTTGGGAGAATTGGAAGGTTGGTTTTGCGTGTAGCTACTTCCAGGGATGATATTGATGTTGTAGCAATTAATGATCCTTTTATTGATGCTAATTATATGTATGATTCTACCCATGGACCATTCAAGGGAACCATTGAGATTTTGGATAACTCTACCTTGAAAATTAATGGGAAGCAGGTTAAAGTTGTGAGCAAAAGAGTCCCCGCGGAGATCCCTTGGGGTGATTTTGGTGCTGATTTTGTTATTGAGTCATCAGGAGCTTTTACAACAATAGAGAAAGCTTCAGCACATTTGAAGggtggtgcCAAGAAAGTTGTAATATCAGCTCCATCTGCTGATGCTCCAATGTTTGTGGTAGGAGTGAATGAGAAGACATACAAACCAAACATGGACATTGTTTCTAATGCAAGCTGTACTACAAATTGTCTTGCTCCTCTTGCCAAGgtgGTTCATGAGGAGTTTGGTATACTTGAAGGTTTGATGACAACTGTACATGCAACAACAGCTACACAAAAGACTGTAGATGGTCCTTCGATGAAAGATTGGAGAGGGGGACGAGGAGCTGGTCAAAATATAATTCCAAGTTCAACTGGTGCAGCAAAAGCTGTTGGGAAAGTTCTTCCCGAGCTTAATGGAAAGCTCACTGGAATGGCATTCCGAGTCCCTACACCCAATGTTTCGGTTGTGGACTTAACCTGTCGACTTCAGAAGAGTGCTTCCTATGAAGATGTCAAAGCTGCAATAAAGTATGCCTCAGAAGGAGCACTGAAAGGAATTCTTGGATACACAGATGAAGATGTTGTCTCCAATGACTTTGTCGGTGATTCAAGGTCTAGTATTTTTGACGCCAACGCTGGGATTGGGCTTAGTACATCTTTAATGAAGCTGGTTTCTTGGTATGACAACGAGTGGGGATACAGCAACCGAGTTCTGGACCTTGTAGAGCACATGTCATTGGTGGGAGCCCTCAACTGA 1263 0.4283 MATSSLLRSAVVSSSRTDLSPSPSHIFKVSCNPSSCNLKSICSKSSIFGTSLPIESLVFQNCHAQSIQPIKATATEIPLPVQKSRSSGKTRVGINGFGRIGRLVLRVATSRDDIDVVAINDPFIDANYMYDSTHGPFKGTIEILDNSTLKINGKQVKVVSKRVPAEIPWGDFGADFVIESSGAFTTIEKASAHLKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMDIVSNASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGAGQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLQKSASYEDVKAAIKYASEGALKGILGYTDEDVVSNDFVGDSRSSIFDANAGIGLSTSLMKLVSWYDNEWGYSNRVLDLVEHMSLVGALN 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1936 420 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 239 396 IPR020829 GO:0016620
Sto7g1936 420 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 89 250 IPR036291 -
Sto7g1936 420 Gene3D - 91 412 - -
Sto7g1936 420 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 232 239 IPR020830 GO:0016620
Sto7g1936 420 SMART gp_dh_n_7 90 234 IPR020828 GO:0051287
Sto7g1936 420 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 1 418 IPR020831 GO:0016620
Sto7g1936 420 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPCP1, CHLOROPLASTIC 1 418 - -
Sto7g1936 420 TIGRFAM GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 91 408 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Sto7g1936 420 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 91 186 IPR020828 GO:0051287
Sto7g1936 420 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 193 206 IPR020831 GO:0016620
Sto7g1936 420 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 228 246 IPR020831 GO:0016620
Sto7g1936 420 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 255 271 IPR020831 GO:0016620
Sto7g1936 420 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 312 329 IPR020831 GO:0016620
Sto7g1936 420 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 352 367 IPR020831 GO:0016620
Sto7g1936 420 Gene3D Dihydrodipicolinate Reductase; domain 2 233 398 - -
Sto7g1936 420 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 233 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1936 Sto-Chr7 24891761 24900036 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1936 7 24891761 24900036 Sto7g1936 7 24891761 24900036 ECH