Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1930 ATGGAGCAAAACACTCTTGTAGACCAAAACTTTCCTCTCTTTTCCAAATCTCATAAACCCTCCAAAAAGCCCACACCGGCCTTCACAACCAACCCCACCGCCTCCACCACAACCACGACAGCCACTATCACTAAAGACCTTAGCTCTGATACTTTGCACCTTGAGAAAATGGAAGTTAGCGATCACGATTCGTCCGCTCCCACAACCTTTGCGGCGCTTGGACTAGCCGAATGGGCAGTGAAGACATGTAGGGAGCTTGGAATGCGCAAACCTAGGCAGGTCCAGTCCCATTGCATACCCAAGATTCTTGACGGCCGCCATGTGCTCGGCATCGACGAGACCGGTAGTGGTAAGACCGCTGCGTTTGCCTTGCCAATTCTACATCGCTTGGCTGAAcatccctttggggtttacgcTTTGGTTGTGACGCCAACAAGAGAGTTGGCGTTCCAGTTGGCAGAGCAATTCAGGGCATTGGGTTCCTGCTTGCATTTGCGAATAGCCGTGGTGGTTGGGGGGATGGACATGCTGCAGCAAACCAAGAATTTGATGTCTAGGCCGCATGTTGTGATTGCCACACCAGGGAGGATCAAGGTCTTGCTCGAGGAAAATCCTGATATTCCTCCTGTTTTTGCTAGGACCAAGTTTCTTGTCTTGGATGAAGCAGATCGAGTTCTTGATGTTGGTTTTCAAGAGGAATTGAAATTCATCTTTCAGTGCTTACCAGAAAACCGGCAAAACCTATTCTTTTCTGCAACGACAACAAGTAGTCTACAAAAGTTACATGAGCGGTACCAAGATAAGCTTTATGTCTTTGAGGCCTATGAAGGCCTGAAAACAGTTGAGACTCTTAAGCAACAGGTTATATTTGTCCCCAAAAAAGTGAAGGAGGTTTATTTAATGCATATATTGTCCAAAATGGAAGATATGGGCATTCGCTCTGCCATTGTATTTGTCTCTACATGCAGAGATTGTCATCGCTTAAGTTTAATGCTGGAAGTGCTTGATCAAGAAGCTGCAGctttatattcatataaatcACAGATTCAGAGGCTTGATGCACTTCATCAATTTAAATCAGGAAAGGTTTCTATACTTCTTGCAACAGATGTTGCCAGCCGCGGTTTGGATATTCCTACTGTTGATCTAGTTATCAATTATGATGTACCAAGGTTTCCTAGAGATTATGTTCATCGTGTAGGTCGTACTGCAAGAGCAGGTAGAGGAGGGCTAGCACTGAGCATTGTCACCCAGAATGACGTTGATCTCATTCGTGAAGTAGAAGCTCTTCTTGAAAAGCAGCTTGAAATGGTTGAATACAAGGAGAATGATGTGCTTTCTCTAATGAAAAAGGTTTTCAGTGCTAAAAATGtggcagaaatgaaaatggtggATGATGGCTTTGAGGAGAAAGCCAAAGAACGAAAAAAGCAGAAACTGAAAATGCTAGCAGAGAAAGGATTGTTAAAGAAAAGGAgcaaaaagaggaaaagaaATTTGGAGGAGAAGAATTCAGATTAA 1521 0.4208 MEQNTLVDQNFPLFSKSHKPSKKPTPAFTTNPTASTTTTTATITKDLSSDTLHLEKMEVSDHDSSAPTTFAALGLAEWAVKTCRELGMRKPRQVQSHCIPKILDGRHVLGIDETGSGKTAAFALPILHRLAEHPFGVYALVVTPTRELAFQLAEQFRALGSCLHLRIAVVVGGMDMLQQTKNLMSRPHVVIATPGRIKVLLEENPDIPPVFARTKFLVLDEADRVLDVGFQEELKFIFQCLPENRQNLFFSATTTSSLQKLHERYQDKLYVFEAYEGLKTVETLKQQVIFVPKKVKEVYLMHILSKMEDMGIRSAIVFVSTCRDCHRLSLMLEVLDQEAAALYSYKSQIQRLDALHQFKSGKVSILLATDVASRGLDIPTVDLVINYDVPRFPRDYVHRVGRTARAGRGGLALSIVTQNDVDLIREVEALLEKQLEMVEYKENDVLSLMKKVFSAKNVAEMKMVDDGFEEKAKERKKQKLKMLAEKGLLKKRSKKRKRNLEEKNSD 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1930 506 PANTHER ATP-DEPENDENT RNA HELICASE DDX49-RELATED 67 498 - -
Sto7g1930 506 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 283 446 IPR001650 -
Sto7g1930 506 Pfam DEAD/DEAH box helicase 93 261 IPR011545 GO:0003676|GO:0005524
Sto7g1930 506 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 68 96 IPR014014 GO:0003724
Sto7g1930 506 PANTHER RNA HELICASE 67 498 - -
Sto7g1930 506 CDD DEADc_DDX49 70 273 - -
Sto7g1930 506 MobiDBLite consensus disorder prediction 1 37 - -
Sto7g1930 506 SMART ultradead3 87 287 IPR014001 -
Sto7g1930 506 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 218 226 IPR000629 -
Sto7g1930 506 Gene3D - 31 271 IPR027417 -
Sto7g1930 506 Gene3D - 272 445 IPR027417 -
Sto7g1930 506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 425 IPR027417 -
Sto7g1930 506 SMART helicmild6 326 407 IPR001650 -
Sto7g1930 506 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 99 272 IPR014001 -
Sto7g1930 506 CDD SF2_C_DEAD 284 416 - -
Sto7g1930 506 Pfam Helicase conserved C-terminal domain 312 407 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1930 Sto-Chr7 24819258 24827319 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1930 7 24819258 24827319 Sto7g1930 7 24819258 24827319 ECH