Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1910 ATGCTTCGCCTTCTGTCAATCGCTTCATATCGTTTTCTTCCTTTTCTGGAATCCCCAGCTGCCAAAACTTCGCAAGTATTCACACCCGCCACCTGTTCGACGATATGCCTAGCCGAAGCTAAAGAGGCGGAGGAAGATACTGCTGATCAAACGTCAGAGGCTGCTCAAATTTTCAGGAAATGGGGTTGTGACGATGTTGATTTGGTGAAAATTTTTAACAGAAACCCACAATTGCGTAAGGCTGATACTGCCCTGATTCAATCTAATCTCTCTCTGCTAAATCGCTTGGGCTTAGGGGCACCTGACCTGGTGAGAATCATCAATTGTAGACCTAGGTTTCTAAGTAGTCGGGTTAATGTTTGTTTTGATGAGAGGCTTGCATATCTTAGTTCCTTGTTTGAGTCAAAGGAAATGCTTAAGAGAGTCATTGTGACAAACCCTTCACTCTTAACCTATGATTTTAACAACACCATTAAACAGACCCTTTCACAATATCAAGAGTTGGGTGTAAACAAACAAGACTTTTTTTTCATGCTCTGTTCTCGGCCCACACTTATTTGTAGGACTTCCTTTAACGAGGAGAAGCTGGATTATATACGCAGGACAGGGATTTCCAAGGATTCCAAGATGTATAAATATGTGGTAACAATAATGGGTATCTCTCGGATTGAAACAATGCGAGAGAAGATAGCGAATTTTGCCAGATTTGGGTTCTCTGAGGATGAAGTATTGGAGTTTTTTGGGCGGTCTCCTCTTGTCTTGACACTATCTGTTGATAAGGTTCAGAGGAATATGACGTTCATATTGGGCACAATGAAGCTTGAAGCTAAAACAGTTGTTCATAGCCCACATCTCTTGTTTTTCAACCTGGATACCCGTTTGAAGCCACGATTTCTGGTATTGACGAAGATACAAGACATGGACTGTGAGTTTAACATTACAGAATCTCTAGTGACTAGGGCTGTGAGGATGAAAGAGAATAGGTTTGTGAATGCGTTCATTAAATGCCGTATGAATGAAGAAGCTGGTGAGTTAATGGAGTTGTATACGAAGGCGAAAGAAGTGAAGAGATTAGCAGGATCATCAAGGAAGTGTGTCCAAAAGGGATTTCCATTCTGA 1119 0.4155 MLRLLSIASYRFLPFLESPAAKTSQVFTPATCSTICLAEAKEAEEDTADQTSEAAQIFRKWGCDDVDLVKIFNRNPQLRKADTALIQSNLSLLNRLGLGAPDLVRIINCRPRFLSSRVNVCFDERLAYLSSLFESKEMLKRVIVTNPSLLTYDFNNTIKQTLSQYQELGVNKQDFFFMLCSRPTLICRTSFNEEKLDYIRRTGISKDSKMYKYVVTIMGISRIETMREKIANFARFGFSEDEVLEFFGRSPLVLTLSVDKVQRNMTFILGTMKLEAKTVVHSPHLLFFNLDTRLKPRFLVLTKIQDMDCEFNITESLVTRAVRMKENRFVNAFIKCRMNEEAGELMELYTKAKEVKRLAGSSRKCVQKGFPF 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1910 372 Gene3D Transcription termination factor 3, mitochondrial 116 341 IPR038538 -
Sto7g1910 372 Pfam mTERF 57 132 IPR003690 GO:0003690|GO:0006355
Sto7g1910 372 Pfam mTERF 123 304 IPR003690 GO:0003690|GO:0006355
Sto7g1910 372 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 19 372 - -
Sto7g1910 372 SMART mt_12 69 99 IPR003690 GO:0003690|GO:0006355
Sto7g1910 372 SMART mt_12 176 205 IPR003690 GO:0003690|GO:0006355
Sto7g1910 372 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Sto7g1910 372 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Sto7g1910 372 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Sto7g1910 372 SMART mt_12 276 308 IPR003690 GO:0003690|GO:0006355
Sto7g1910 372 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Sto7g1910 372 PANTHER CGI-12 PROTEIN-RELATED 19 372 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1910 Sto-Chr7 24670299 24671417 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sto7g1910 mTERF 5.3e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1910 7 24670299 24671417 Sto7g1910 7 24670299 24671417 ECH