LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto7g0099	ATGGAACCTCTACAAACTGCTTCACTGAATGTTTGGTTTTGGATTAATATTGTTGGTACATTGCTTATCGTTGCGGGAGTGATAATAGCGTTAGTGAGAGTGGTGAATTCTGTGTGGGTGAGGCCCAAAACACTAGAGAGATCCCTCACACAACAAAATCTCAGAGGCAATTCCTACAGATTTGTGTATGGAGACTTGAAAGAAATAGGGAAGATGACCCAACAAGCTAATTCCAAACCCATTCGCTTAGATGATGATATCGTCCCTCGTATCATTCCATTTCATCTTCAAACCATTCGCAACTATGGTGAGAAATGTTTTATTTGGCTTGGAGGTAGGCCAATGGTGAATATTACAAATCCGGAAGAGATAAAGGATGTTTTCAACAACATTTCTGTATTTCAAAAGCTTCCTCACAATCCACTTGCTGAACTCCTAATTACCGGAATTATACACTACAACGGTGAAACTTGGGTCAAGCACAGAAGAATTATCAACCCTGCTTTTCATCTTCACAAGTTAAAGCTTATGTTACCAGCATTCTACGAGTGTTGTAACAAAATGGTAAATGAATGGAAGAAATTAGTAAGTGAAAGTGAAAGGGGTTGTGATATGAATCAAAAGAAAAGGAGCTGCCCAATTGAGCCCAAGGGAAGGAAGGCCACGGCTCAAGATGAATGGGCCATCTATTGTACTACAATGAGCCCAAAACAACTAGAGAAGTCAGAATGTGCAAGAGGCAGCTACTGGGGTCTTGATATATCAactggtgctttcattgagagctTTGCAATGGCAAAATTGAACTCCACATATGAAAATTCATGGCAAAGGGTGAGTGACTCACTAACAAGAGTGGAAGCTCTAATGAAGCAACTCTATTTCTTAAAGTTTGGTGAAGAGTGGGATGAAGTGCAAGCTGCGGAGTTGAAATCCAGATCTGATGTGGAACGCGATACACAGGATGAAGACCTTCGTCTAGGTTCTGTGATCTCGCTGACGTCGAAATCAGAAGAAGATGAGCAAGAAGAAATTAACATCGGTGCTGTGATTCTCGAACCAGAAGCAGAAGTGACTGAAGCATCCGTGGATTTGCGATCTGAGCACCTCAATGATGAACAATTTGGATCCTATGAAGTTTCTGATGTCCACGTTTCACCCTGTGATATGGAGGTAAATGATCGACGTTACTCAAAAGTTTTTAACGCTGGGACGACCAACCTCGAAATGGGAACAGAGTGCGTTGAAGACGAAGTCATAATCGATTGTTCGAATGTTGAGGCCACACAAGCAGATGACGAACAAGAAGAAGTGAAAACAGTTGCGATGATTCAGAGTAATGCAAACTGGAAAATTCTGCTGGAAAGTGTTGGCTCTACTGATGTGAATGTGCTAGCCGTGCCTATCGAAATAGATGCCAAATTTGGGTGTGTATATGATGCACATGAGGTGCTTGATGAGTGGTATGATAGAGATACTATAACTAACTCTACAAAAGTTACTGAGATGGATTGGGGAAACAAAAAGATCAAGATAATGGGTGAGGTAATTAAACTACACATTCCCTGCCCTGTTCATCTTGTTCTTGATTATtactttttggtgcaaaatgaAGTATATGTACTGTTAAACCTCTCTTGGGCGAGACTTATGATATGGAAGATTAATGGCTTGCTTTGTGTGCTAATACATGATCCTGGGGGGTTTCGTTGTGCCTTGAATTACTTCTATAActgcaaaaattattttcacaagCTTAAAGATTGTAGTTACCTAGAAATGCCCTCAACATGTTTGAGAAAATGTTGCACCCAAACTCTAAAAAGCCACCTGTGGTCTATGGTTCTTCCAATTTTGGTTATATCTAAGTCATATGTTTTGTTGTTCTATGAAGAAGACTATTTGCTGGTTATATATGAGCTTATCTATCCTCATTCCAATATGAATATTGGTTGTGAGTTTGAATTATCTATGACTCTAAGGCTtataagagagaatttggggtGTTTGGTTCCTATCATTATTTCTATGGCTAATGGCGTTACTGAAAAACAACAGTCGTTTGGATTTGAAGAAATATGGTTTCTAGTTGGTGCACTTACTTGTGAAATCAATGCTGCAACAGTTTCAACATGTTCCAAAAGTAAAATGCTTGTTCTCCTTGGAAATTCTCATTTATTAACTACATCAACTATGGAAATGTGGGCAATTCAAGACCTGTTAATTGAGAAaaattttaagtcctcaactaTCATGTTATTTGGGAGTATGCTGGCAATTGTGGCTGTGAATTTATATGACATAAATCTGGGCAATGTTTTCAATGAAGTTTTATTCGAGAAAATTGCTGATGATTATACTAATGAAATGAAAAGATTGAGACTATGGAAAATATATGTTACACATAAGAGTGTGAATTCTTTGCTCTTAAGAAGTTCAAGTGTCCAACTTGCAGCCAAAATATATGGCAGTCCTAATCTACTTTCTACTGCACCAAAGACATATAAGCATGAAGACTCTTCATTGGCTTGGATGGCTTTGTCTGTTTTGGATGTCTTCATACTAGATAAAGAAAAGGAGAATTTTTCAATTGCTAGATTCAAGTCATTTCCATTTGATCCTGGAGGTTGTTGGTACAGTAATCTTTATTGGACTGATGTTTCTTATACTGAACtcaaccttgaggacaaggttgtTTTTGAAGATTGGGGTTGTATAGATTTAGATGTGTGGCCTATGTTTCAAGGCATGACAGGTGATGTCATTTCTCGAACTGCATTTGGAAGTAGCTATGAAGAAGGCACAAAAGTACTCCAACTTCTAACTCAACAACTGCATCTTACACACAAGGTCCTACATTCTATTTATATTCCAGGCTGGAGATTTGTCCCTACTAAGCTGAACAAGAGGTTGAAGGAGATAGAGAAGGAAATAACAGAATTACTAAGAGGAATCATTAACAAAAGAGAGAAGGCTAGAGAGGAAGGAGAAGCCCCTACTGATGATTTATTAGGCATCCTTTTGGAATCAAATCGTAGAGAAATGGaagatattaataataataacgtTGGACTGAGTATTGATGAAGTAATAAAGGAATGCAAATTGTTTTATCTAGCAGGGCAAGAGACAACCTCTGTGTTGCTTAATTGGACAATTGTGTTACTAAGTAAGTTTCCCAATTGGCAAGCTAAGGCAAGAGAAGAGGTCCTCCAAGTCTTTGGCACTCAAAAACTTAACTACGAAGGCTTAAATCGTCTCAAAGTGGTAACTCCTACATTGACAAGAGTGGTATTAGAGGAAACAAGACTTGGAAATTTGAGATTACCAGCTGGAAGTGGAATTGTGATTCCAGCAATTTTAGTACACCAAGATCCTCTGCTTTGGGGAGATGATGCCAAAGACTTCAACCCACAAAGATTTTGTGAAGGAATTTCAAAAGCAACAAAGAGTCAAACTTCGTATCTTCCATTTGGATGGGGTCCAAGGATTTGCATTGGTCAAAACTTCGCTTTGCTTGAAGCTAAAATGGCTTTGTCTTTGATTCTTCAGAACTTCTCCTTTGAACTCTCTCCATCTTATACCCATGCTCCCACTGCGGTTTTCAACATTCAGCCTCAGTTTGGCACCCATATCATTCTACATAAGCTCTAG	3654	0.3738	MEPLQTASLNVWFWINIVGTLLIVAGVIIALVRVVNSVWVRPKTLERSLTQQNLRGNSYRFVYGDLKEIGKMTQQANSKPIRLDDDIVPRIIPFHLQTIRNYGEKCFIWLGGRPMVNITNPEEIKDVFNNISVFQKLPHNPLAELLITGIIHYNGETWVKHRRIINPAFHLHKLKLMLPAFYECCNKMVNEWKKLVSESERGCDMNQKKRSCPIEPKGRKATAQDEWAIYCTTMSPKQLEKSECARGSYWGLDISTGAFIESFAMAKLNSTYENSWQRVSDSLTRVEALMKQLYFLKFGEEWDEVQAAELKSRSDVERDTQDEDLRLGSVISLTSKSEEDEQEEINIGAVILEPEAEVTEASVDLRSEHLNDEQFGSYEVSDVHVSPCDMEVNDRRYSKVFNAGTTNLEMGTECVEDEVIIDCSNVEATQADDEQEEVKTVAMIQSNANWKILLESVGSTDVNVLAVPIEIDAKFGCVYDAHEVLDEWYDRDTITNSTKVTEMDWGNKKIKIMGEVIKLHIPCPVHLVLDYYFLVQNEVYVLLNLSWARLMIWKINGLLCVLIHDPGGFRCALNYFYNCKNYFHKLKDCSYLEMPSTCLRKCCTQTLKSHLWSMVLPILVISKSYVLLFYEEDYLLVIYELIYPHSNMNIGCEFELSMTLRLIRENLGCLVPIIISMANGVTEKQQSFGFEEIWFLVGALTCEINAATVSTCSKSKMLVLLGNSHLLTTSTMEMWAIQDLLIEKNFKSSTIMLFGSMLAIVAVNLYDINLGNVFNEVLFEKIADDYTNEMKRLRLWKIYVTHKSVNSLLLRSSSVQLAAKIYGSPNLLSTAPKTYKHEDSSLAWMALSVLDVFILDKEKENFSIARFKSFPFDPGGCWYSNLYWTDVSYTELNLEDKVVFEDWGCIDLDVWPMFQGMTGDVISRTAFGSSYEEGTKVLQLLTQQLHLTHKVLHSIYIPGWRFVPTKLNKRLKEIEKEITELLRGIINKREKAREEGEAPTDDLLGILLESNRREMEDINNNNVGLSIDEVIKECKLFYLAGQETTSVLLNWTIVLLSKFPNWQAKAREEVLQVFGTQKLNYEGLNRLKVVTPTLTRVVLEETRLGNLRLPAGSGIVIPAILVHQDPLLWGDDAKDFNPQRFCEGISKATKSQTSYLPFGWGPRICIGQNFALLEAKMALSLILQNFSFELSPSYTHAPTAVFNIQPQFGTHIILHKL	1217

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto7g0099	1217	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	1158	1167	IPR017972	GO:0005506\|GO:0016705
	Sto7g0099	1217	Gene3D	Cytochrome P450	893	1212	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto7g0099	1217	SUPERFAMILY	Cytochrome P450	908	1215	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto7g0099	1217	PRINTS	P450 superfamily signature	1040	1057	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto7g0099	1217	PRINTS	P450 superfamily signature	1156	1165	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto7g0099	1217	PRINTS	P450 superfamily signature	1165	1176	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto7g0099	1217	Coils	Coil	971	991	-	-
	Sto7g0099	1217	SUPERFAMILY	Cytochrome P450	91	206	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto7g0099	1217	Pfam	Cytochrome P450	100	207	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto7g0099	1217	Pfam	Cytochrome P450	908	1193	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto7g0099	1217	PANTHER	CYTOCHROME P450-LIKE	896	1214	-	-
	Sto7g0099	1217	PANTHER	CYTOCHROME P450-LIKE	13	205	-	-
	Sto7g0099	1217	Gene3D	Cytochrome P450	42	219	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto7g0099	1217	PANTHER	CYTOCHROME P450 FAMILY MEMBER	13	205	-	-
	Sto7g0099	1217	PANTHER	CYTOCHROME P450 FAMILY MEMBER	896	1214	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto7g0099	Sto-Chr7	735531	740155	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto7g0099	33	206	Cytochrome P450	AT3G14680	45.977	4.61e-48	178

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto7g0099	7	735531	740155	Sto7g0099	7	735531	740155	ECH